DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0016577
GenePolr1a
Synonyms194kDa
mRPA1
RPA194
Rpo1-4
Desc.polymerase (RNA) I polypeptide A
LocusNM_009088 chr6:71859047-71929355(+)
DB links


Entrez 20019
MGI 1096397
Ensembl ENSMUSG00000049553
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2017063
(v2.0)
Polr1aNM_00908820019
7.1924416.24635.2439.302153.805315.447925.30345.0113444.117914.831
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0016577
(v1.0)
Polr1a20019
MGA0.96196
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2017063
(v2.0)
Polr1a20019
642/450-0.0002458/450-0.0906114/4501.5944287/4500.679410/450-3.309895/450-2.8237
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2017063
(v2.0)
Polr1a20019
277/1920.0159192/192-0.1156105/1922.6556271/1921.8153/192-3.558136/192-2.9624
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2017063
(v2.0)
Polr1a20019
74.979213854.33
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2017063
(v2.0)
Polr1a20019
21.14778126.11
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0016577
(v1.0)
Polr1aNM_00908820019
16.89213.6354229.239637.284717.9524
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0016577
(v1.0)
Polr1aNM_00908820019
333.576112.187670.0881040.17373.591
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0016577
(v1.0)
Polr1aNM_00908820019
17.66222.630353.96632
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0016577
(v1.0)
Polr1aNM_00908820019
17.24013.598923.71889
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0016577
(v1.0)
Polr1aNM_00908820019
49.81246.4769
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0016577
(v1.0)
Polr1aNM_00908820019
17.67252.594324.07875
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0016577
(v1.0)
Polr1aNM_00908820019
27.071335.999930.4705
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0016577
(v1.0)
Polr1aNM_00908820019
380.832292.529
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0016577
(v1.0)
Polr1aNM_00908820019
17.01295.45206
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0016577
(v1.0)
Polr1aNM_00908820019
1.630530.868742
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0016577
(v1.0)
1528C0224C06-3Mm.7387Rpo1-420019
U007028NAP001456-002Rpo1-4;TC870210,TC810068O35134U,F2.77562.86812.80033.1512.74883.21562.9731
0016577
(v1.0)
5001G0118H07-3Mm.7387Rpo1-420019
U007028NAP001456-002Rpo1-4;TC870210,TC810068O35134U,F3.22293.08953.48313.92963.45743.68993.3281
0016577
(v1.0)
20341L0539E06-3Mm.7387Rpo1-420019
U007028NAP093583-001Rpo1-4;TC810069,TC810066O35134U,F2.55972.67272.80273.10522.91283.2172.939
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0016577
(v1.0)
1456066_a_atMm.135581Polr1aNM_009088.320019
89.4500077.425
0016577
(v1.0)
1417775_atMm.135581Polr1aNM_009088.320019
00149.95187.05119.7
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0016577
(v1.0)
A_51_P236197Rpo1-4NM_00908820019
11P0.650.162P
Proteome N/A