DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0016585
GenePolr2d
SynonymsHSRBP4
RBP4
Desc.polymerase (RNA) II (DNA directed) polypeptide D
LocusNM_027002 chr18:31948813-31956296(+)
NM_027101 chr18:31948830-31956355(+)
DB links


Entrez 69241
MGI 1916491
Ensembl ENSMUSG00000024258
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2017071
(v2.0)
Polr2dNM_02710169241
12.2884214.44845.3452101.91983.165423.318618.496650.012780.934934.6232
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0016585
(v1.0)
Polr2d69241
Maternal RNA0.91586
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2017071
(v2.0)
Polr2d69241
594/425-0.0297402/425-0.19699/4251.473294/4250.79613/425-2.8802123/425-2.3739
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2017071
(v2.0)
Polr2d69241
289/1840.1378179/184-0.155189/1842.4772275/1841.89676/184-2.690759/184-2.2115
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2017071
(v2.0)
Polr2d69241
63.605211057.82
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2017071
(v2.0)
Polr2d69241
15.63636026.06
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0016585
(v1.0)
Polr2dNM_02710169241
222.84131.471875.884157.754913.2015
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0016585
(v1.0)
Polr2dNM_02710169241
277.62435.285187.770269.474216.1398
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0016585
(v1.0)
Polr2dNM_02710169241
2334.4939934.3364
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0016585
(v1.0)
Polr2dNM_02710169241
227.43231.155837.08
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0016585
(v1.0)
Polr2dNM_02710169241
35.827244.8295
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0016585
(v1.0)
Polr2dNM_02710169241
233.1364.4324440.6681
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0016585
(v1.0)
Polr2dNM_02710169241
70.256855.764656.0729
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0016585
(v1.0)
Polr2dNM_02710169241
68.722268.1305
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0016585
(v1.0)
Polr2dNM_02710169241
70.121636.7942
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0016585
(v1.0)
Polr2dNM_02710169241
66.1935104.092
NIA60mer N/A
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0016585
(v1.0)
1424258_atMm.279898Polr2dNM_027101.2,NM_027002.369241
2952.1751243.5856.675553.9370.025
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0016585
(v1.0)
A_51_P419571Polr2dNM_02710169241
11P0.8030.272P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0016585
(v1.0)
Polr2d69241
33235.55