DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0016587
GenePolr2f
SynonymsRNA Pol II
Desc.polymerase (RNA) II (DNA directed) polypeptide F
LocusNM_027231 chr15:78971797-78982197(+)
DB links


Entrez 69833
MGI 1349393
Ensembl ENSMUSG00000033020
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2017073
(v2.0)
Polr2fNM_02723169833
121.91716.549266.3897129.38108.167102.93621.71587.6517136.509121.855
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0016587
(v1.0)
Polr2f69833
2-Cell Transient0.92991
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2017073
(v2.0)
Polr2f69833
650/4370.0599397/437-0.2541199/4372.4339427/4371.29399/437-0.0835516/437-0.3587
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2017073
(v2.0)
Polr2f69833
292/1600.3531148/160-0.2271188/1603.7359389/1602.594237/160-0.0533168/160-0.525
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2017073
(v2.0)
Polr2f69833
113.36218262.29
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2017073
(v2.0)
Polr2f69833
16.98358120.97
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0016587
(v1.0)
Polr2fNM_02723169833
17.212146.373896.512275.207315.6814
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0016587
(v1.0)
Polr2fNM_02723169833
25.349161.0387136.729113.66622.1857
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0016587
(v1.0)
Polr2fNM_02723169833
17.996844.586350.5948
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0016587
(v1.0)
Polr2fNM_02723169833
17.566745.908165.0083
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0016587
(v1.0)
Polr2fNM_02723169833
62.873699.7196
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0016587
(v1.0)
Polr2fNM_02723169833
18.007343.975671.2989
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0016587
(v1.0)
Polr2fNM_02723169833
89.355272.615694.6969
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0016587
(v1.0)
Polr2fNM_02723169833
115.152149.457
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0016587
(v1.0)
Polr2fNM_02723169833
137.993266.954
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0016587
(v1.0)
Polr2fNM_02723169833
136.143220.092
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0016587
(v1.0)
11902H3127E04-3Mm.222301810060D16Rik69833
U016422NAP098267-001TC805491U,F,23.36743.41833.29623.65333.45363.58843.4248
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0016587
(v1.0)
1415754_atMm.279861Polr2fNM_027231.169833
481.85743.4251992.351270.05701.6
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0016587
(v1.0)
A_51_P120729Polr2fNM_02723169833
11P0.9370.63P
0016587
(v1.0)
A_52_P276222Polr2fNM_02723169833
11P0.9110.523P
Proteome N/A