DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0016674
GenePphln1
SynonymsCR
Desc.periphilin 1
LocusNM_001083114 chr15:93228781-93322343(+)
NM_146062 chr15:93228781-93322343(+)
NM_175363 chr15:93228781-93322343(+)
DB links


Entrez 223828
MGI 1917029
Ensembl ENSMUSG00000036167
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2017164
(v2.0)
Pphln1NM_001083114,NM_001285863,NM_001285864,NM_146062,NM_175363223828
4.26414.190519.162627.744428.33085.6951412.002416.983721.53695.47868
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0016674
(v1.0)
Pphln1223828
Major ZGA0.95012
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2017164
(v2.0)
Pphln1223828
739/4000.3719505/4000.2196181/4002.4219468/4001.55189/400-3.279187/400-2.779
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2017164
(v2.0)
Pphln1223828
367/1520.755232/1520.4911173/1523.6853452/1522.8831/152-4.229140/152-2.4812
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2017164
(v2.0)
Pphln1223828
65.666815642.09
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2017164
(v2.0)
Pphln1223828
21.074810719.7
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0016674
(v1.0)
Pphln1NM_001083114,NM_146062,NM_175363223828
14.673613.16720.645119.58578.39203
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0016674
(v1.0)
Pphln1FR204721,NM_001083114,NM_146062,NM_175363223828
20.010718.429530.889236.804818.2136
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0016674
(v1.0)
Pphln1NM_001083114,NM_146062,NM_175363223828
15.34261.5593914.3655
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0016674
(v1.0)
Pphln1NM_001083114,NM_146062,NM_175363223828
14.975913.034812.4919
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0016674
(v1.0)
Pphln1FR204721,NM_001083114,NM_146062,NM_175363223828
16.9914.3968
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0016674
(v1.0)
Pphln1NM_001083114,NM_146062,NM_175363223828
15.35151.5380313.7007
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0016674
(v1.0)
Pphln1NM_001083114,NM_146062,NM_175363223828
19.114118.910814.6903
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0016674
(v1.0)
Pphln1FR204721,NM_001083114,NM_146062,NM_175363223828
36.407324.6604
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0016674
(v1.0)
Pphln1NM_001083114,NM_146062,NM_175363223828
35.249862.5723
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0016674
(v1.0)
Pphln1NM_001083114,NM_146062,NM_175363223828
3.782794.67948
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0016674
(v1.0)
10168H3092A07-3Mm.45562MGC27795223828
U016598NAP000863-001MGC27795;TC887107,TC838001,TC837999U,F,22.77572.90243.16983.49762.88943.03872.8004
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0016674
(v1.0)
1434822_atMm.74208Pphln1NM_146062.2,NM_175363.3,NM_001083114.1223828
1206.9751527.275833.0751108.551381.125
0016674
(v1.0)
1435766_atMm.74208Pphln1NM_146062.2,NM_175363.3,NM_001083114.1223828
1110.8432.851838.252586.1715.7
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0016674
(v1.0)
A_51_P482925Pphln1NM_175363223828
11P1.2360.281P
0016674
(v1.0)
A_52_P233335Pphln1NM_146062223828
11P1.20.321P
Proteome N/A