DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0016675
GenePpia
SynonymsCphn
cyclophilin A
CyP-18
CypA
Desc.peptidylprolyl isomerase A
LocusNM_008907 chr11:6315873-6319813(+)
DB links


Entrez 268373
MGI 97749
Ensembl ENSMUSG00000071866
Vega OTTMUSG00000000783
Featureprotein-coding
GO(BP)
  •   3 Terms
GO(MF)
  •   2 Terms
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2017165
(v2.0)
PpiaNM_008907268373
530.0943.372723.8575276.1991155.646716.511456.9615.3026822.1178765.42
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0016675
(v1.0)
Ppia268373
MGA0.99515
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2017165
(v2.0)
Ppia268373
672/4230.1546425/423-0.1091256/4232.8414685/4232.020314/423-2.774139/423-2.1927
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2017165
(v2.0)
Ppia268373
364/1760.533216/1760.1783247/1763.9996638/1763.1713/176-3.435450/176-2.38
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2017165
(v2.0)
Ppia268373
52.274714536.05
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2017165
(v2.0)
Ppia268373
15.758610015.76
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0016675
(v1.0)
PpiaNM_008907268373
45.032416.3669205.101799.0371027.91
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0016675
(v1.0)
PpiaNM_008907268373
000.07095610.7411271.26644
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0016675
(v1.0)
PpiaNM_008907268373
47.0855193.85917.8566
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0016675
(v1.0)
PpiaNM_008907268373
45.960116.202511.3604
SOLiD_NMNR_Partheno1C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0016675
(v1.0)
PpiaNM_008907268373
47.1129191.20412.4597
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0016675
(v1.0)
PpiaNM_008907268373
189.892771.502570.583
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0016675
(v1.0)
PpiaNM_008907268373
0.7331130.135583
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0016675
(v1.0)
PpiaNM_008907268373
110.222847.14
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0016675
(v1.0)
PpiaNM_008907268373
0.196210.404955
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0016675
(v1.0)
4866G0110B10-3Mm.5246Ppia19034
U012297NAP094243-001TC866007,TC835369,TC835340,TC835336,TC835334,TC835333P17742U,F,22.85583.12113.26853.32243.21963.44093.4744
0016675
(v1.0)
22328L0957D01-3Mm.5246Ppia19034
2.70882.37822.07812.70673.05922.99773.0056
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0016675
(v1.0)
1417451_a_atMm.5246PpiaNM_008907.1268373
1190.425531.1252367.1757798.4256664.95
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0016675
(v1.0)
A_52_P265542PpiaNM_008907268373
1 (0.988 to 1.012)1P1.389 (1.14 to 1.622)0.000404P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0016675
(v1.0)
Ppia268373
13109876454