DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0016693
GenePpm1b
SynonymsPP2CB
Desc.protein phosphatase 1B, magnesium dependent, beta isoform
LocusNM_001159497 chr17:85356081-85423332(+)
NM_011151 chr17:85357341-85416468(+)
NM_001159496 chr17:85357341-85414116(+)
NM_001159498 chr17:85373392-85423332(+)
DB links


Entrez 19043
MGI 101841
Ensembl ENSMUSG00000061130
Featureprotein-coding
GO(BP)
  •   2 Terms
GO(MF)
GO(CC)
KEGG
  •   1 Terms
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2017183
(v2.0)
Ppm1bNM_001159496,NM_001159497,NM_001159498,NM_01115119043
56.6892117.295181.37149.42892.844357.21323.8022171.633103.33939.4102
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0016693
(v1.0)
Ppm1b19043
Minor ZGA0.9189
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2017183
(v2.0)
Ppm1b19043
797/3330.7445637/3330.81771010/3335.15163527/3334.725732/333-1.2951217/333-1.2115
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2017183
(v2.0)
Ppm1b19043
431/1291.2211308/1291.1333744/1296.00122020/1295.2736/129-2.191969/129-1.4819
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2017183
(v2.0)
Ppm1b19043
61.491516736.82
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2017183
(v2.0)
Ppm1b19043
16.516710915.15
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0016693
(v1.0)
Ppm1bNM_001159496,NM_001159497,NM_001159498,NM_01115119043
121.856125.721111.12564.361716.7712
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0016693
(v1.0)
Ppm1bNM_001159496,NM_001159497,NM_001159498,NM_01115119043
98.526563.165558.655125.994211.63
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0016693
(v1.0)
Ppm1bNM_001159496,NM_001159497,NM_001159498,NM_01115119043
127.41220.7318137.165
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0016693
(v1.0)
Ppm1bNM_001159496,NM_001159497,NM_001159498,NM_01115119043
124.366124.459127.179
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0016693
(v1.0)
Ppm1bNM_001159496,NM_001159497,NM_001159498,NM_01115119043
39.15639.2628
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0016693
(v1.0)
Ppm1bNM_001159496,NM_001159497,NM_001159498,NM_01115119043
127.48620.4479139.485
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0016693
(v1.0)
Ppm1bNM_001159496,NM_001159497,NM_001159498,NM_01115119043
102.88462.143871.6333
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0016693
(v1.0)
Ppm1bNM_001159496,NM_001159497,NM_001159498,NM_01115119043
17.854422.8021
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0016693
(v1.0)
Ppm1bNM_001159496,NM_001159497,NM_001159498,NM_01115119043
220.23666.4619
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0016693
(v1.0)
Ppm1bNM_001159496,NM_001159497,NM_001159498,NM_01115119043
82.745996.1432
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0016693
(v1.0)
6314H3022H06-3Ppm1b19043
U018292NAP119160-1Ppm1b;ppm1b1;TC832854P36993U,F,23.81233.68353.31473.46372.70153.30023.1955
0016693
(v1.0)
19943L0510B11-3Mm.849Ppm1b19043
U018292NAP001609-002Ppm1b;ppm1b1;TC887440P36993U,F,23.91133.73723.02093.14122.68962.93343.0482
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0016693
(v1.0)
1425330_a_atMm.249695Ppm1bNM_011151.2,NM_001159496.1,NM_001159497.1,NM_001159498.119043
592.7251944.725527.9094
0016693
(v1.0)
1451669_atMm.249695Ppm1bNM_011151.2,NM_001159496.1,NM_001159497.1,NM_001159498.119043
1049.82223.6751452.4751334.3251753.175
0016693
(v1.0)
1426382_atMm.249695Ppm1bNM_011151.2,NM_001159496.1,NM_001159497.1,NM_001159498.119043
961.2251727.3897.875214.8567.85
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0016693
(v1.0)
A_51_P140541Ppm1bBC09096319043
11P1.0260.839P
0016693
(v1.0)
A_52_P34043Ppm1bNM_01115119043
11P1.360.2P
0016693
(v1.0)
A_52_P402175Ppm1bNM_01115119043
11P0.7920.258P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0016693
(v1.0)
Ppm1b19043
220.17260.17