DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0016704
GenePpme1
SynonymsPME-1
Desc.protein phosphatase methylesterase 1
LocusNM_028292 chr7:107475247-107520406(-)
DB links


Entrez 72590
MGI 1919840
Ensembl ENSMUSG00000030718
Featureprotein-coding
GO(BP)
GO(MF)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2017194
(v2.0)
Ppme1NM_02829272590
17.559554.11794.737715.1710.764919.699718.0217116.91913.219623.3283
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0016704
(v1.0)
Ppme172590
Minor ZGA0.99671
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2017194
(v2.0)
Ppme172590
693/3520.4633566/3520.5677986/3525.03963760/3524.738533/352-1.3311151/352-1.8101
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2017194
(v2.0)
Ppme172590
377/1510.8031278/1510.7604803/1515.90222545/1515.383121/151-0.760473/151-1.6278
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2017194
(v2.0)
Ppme172590
39.557111335.01
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2017194
(v2.0)
Ppme172590
11.82258414.07
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0016704
(v1.0)
Ppme1NM_02829272590
56.263465.771911.28847.4714412.8109
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0016704
(v1.0)
Ppme1FR399796,NM_02829272590
529.26649.05992.1954107.174100.956
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0016704
(v1.0)
Ppme1NM_02829272590
58.82866.4216971.7585
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0016704
(v1.0)
Ppme1NM_02829272590
57.422565.111486.8157
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0016704
(v1.0)
Ppme1FR399796,NM_02829272590
3494.21820.57
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0016704
(v1.0)
Ppme1NM_02829272590
58.86286.3337495.2165
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0016704
(v1.0)
Ppme1NM_02829272590
10.45137.213989.2184
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0016704
(v1.0)
Ppme1FR399796,NM_02829272590
18.931234.6499
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0016704
(v1.0)
Ppme1NM_02829272590
21.52891.43432
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0016704
(v1.0)
Ppme1NM_02829272590
42.586419.1204
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0016704
(v1.0)
3868C0904B01-3Mm.1775022700017M01Rik72590
U028909NAP003684-0012700017M01Rik;TC941222Q9CSP7U,F3.64773.65673.49973.40343.41283.40673.4594
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0016704
(v1.0)
1423810_atMm.177502Ppme1NM_028292.272590
259.65357.1000
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0016704
(v1.0)
A_52_P2172402700017M01RikNM_02829272590
11P1.6730.122P
0016704
(v1.0)
A_52_P2719252700017M01RikNM_02829272590
11P0.9650.783P
0016704
(v1.0)
A_52_P698672700017M01RikNM_02829272590
11P0.2940.0675P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0016704
(v1.0)
Ppme172590
032043