DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0016754
GenePpp2r1b
Synonyms
Desc.protein phosphatase 2 (formerly 2A), regulatory subunit A (PR 65), beta isoform
LocusNM_028614 chr9:50665040-50689727(+)
NM_001034085 chr9:50665040-50702334(+)
DB links


Entrez 73699
MGI 1920949
Ensembl ENSMUSG00000032058
Vega OTTMUSG00000037681
Featureprotein-coding
GO(BP)
  •   1 Terms
      positive regulation of extrinsic apoptotic signaling pathway in absence of ligand (GO:2001241)
GO(MF)
GO(CC)
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2017246
(v2.0)
Ppp2r1bNM_001034085,NM_001286553,NM_02861473699
18.82798.5490820.319111.509810.39318.681531.905115.396810.002523.5489
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0016754
(v1.0)
Ppp2r1b73699
Minor ZGA0.8824
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2017246
(v2.0)
Ppp2r1b73699
716/505-0.0091478/505-0.1951264/5052.6365676/5051.747100/505-0.276686/505-0.1571
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2017246
(v2.0)
Ppp2r1b73699
316/1540.5213207/1540.3087238/1544.1257601/1543.274729/154-0.3406125/154-0.8923
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2017246
(v2.0)
Ppp2r1b73699
108.538218658.35
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2017246
(v2.0)
Ppp2r1b73699
18.47449220.08
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0016754
(v1.0)
Ppp2r1bNM_001034085,NM_02861473699
8.9144914.09828.589337.2222222.6458
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0016754
(v1.0)
Ppp2r1bFR374813,NM_001034085,NM_02861473699
80.132881.839362.272746.1603201.755
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0016754
(v1.0)
Ppp2r1bNM_001034085,NM_02861473699
9.320916.8847415.3815
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0016754
(v1.0)
Ppp2r1bNM_001034085,NM_02861473699
9.0981313.956711.4273
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0016754
(v1.0)
Ppp2r1bFR374813,NM_001034085,NM_02861473699
90.6623100.023
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0016754
(v1.0)
Ppp2r1bNM_001034085,NM_02861473699
9.326336.7904512.5331
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0016754
(v1.0)
Ppp2r1bNM_001034085,NM_02861473699
7.952386.973346.94357
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0016754
(v1.0)
Ppp2r1bFR374813,NM_001034085,NM_02861473699
99.287782.3194
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0016754
(v1.0)
Ppp2r1bNM_001034085,NM_02861473699
5.663491.835
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0016754
(v1.0)
Ppp2r1bNM_001034085,NM_02861473699
5.846315.05382
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0016754
(v1.0)
12842H3153C10-3Mm.214282410091N08Rik73699
U010472NAP095564-0012410091N08Rik;TC898649Q9CWG6U,F3.60423.53953.29473.31923.48953.35853.4745
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0016754
(v1.0)
1428265_atMm.7726Ppp2r1bNM_001034085.1,NM_028614.273699
138.5203.575166.625144.475468.175
Agilent44K N/A
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0016754
(v1.0)
Ppp2r1b73699
0600140