DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0016765
GenePpp2r5c
SynonymsB56/PP2A gamma
Band 8A
D12Bwg0916e
Desc.protein phosphatase 2, regulatory subunit B (B56), gamma isoform
LocusNM_001135001 chr12:111685389-111809900(+)
NM_001081457 chr12:111723949-111821271(+)
NM_012023 chr12:111723949-111821271(+)
NM_001081458 chr12:111723949-111809900(+)
DB links


Entrez 26931
MGI 1349475
Ensembl ENSMUSG00000017843
Featureprotein-coding
GO(BP)
  •   5 Terms
      DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest (GO:0006977)
      signal transduction (GO:0007165)
      negative regulation of cell proliferation (GO:0008285)
      intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator (GO:0042771)
      proteasomal ubiquitin-dependent protein catabolic process (GO:0043161)
GO(MF)
  •   2 Terms
GO(CC)
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2017258
(v2.0)
Ppp2r5cNM_001081457,NM_001081458,NM_001135001,NM_01202326931
37.284976.3953153.21889.893536.162746.926423.6416118.30431.637347.1737
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0016765
(v1.0)
Ppp2r5c26931
Minor ZGA0.9776
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2017258
(v2.0)
Ppp2r5c26931
688/522-0.1142408/522-0.4706146/5221.7397450/5221.11347/522-3.981684/522-3.2119
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2017258
(v2.0)
Ppp2r5c26931
253/203-0.1941149/203-0.559103/2032.5524248/2031.60822/203-4.051923/203-3.6562
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2017258
(v2.0)
Ppp2r5c26931
101.751519651.91
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2017258
(v2.0)
Ppp2r5c26931
23.83711221.28
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0016765
(v1.0)
Ppp2r5cNM_001081457,NM_001081458,NM_001135001,NM_01202326931
79.4761105.65466.819425.029416.737
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0016765
(v1.0)
Ppp2r5cFR056625,FR216134,FR242013,FR272800,NM_001081457,NM_001081458,NM_001135001,NM_01202326931
212.189238.714166.07954.488937.7827
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0016765
(v1.0)
Ppp2r5cNM_001081457,NM_001081458,NM_001135001,NM_01202326931
83.099613.6611115.271
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0016765
(v1.0)
Ppp2r5cNM_001081457,NM_001081458,NM_001135001,NM_01202326931
81.1134104.59387.6024
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0016765
(v1.0)
Ppp2r5cFR056625,FR216134,FR242013,FR272800,NM_001081457,NM_001081458,NM_001135001,NM_01202326931
1126.21352.788
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0016765
(v1.0)
Ppp2r5cNM_001081457,NM_001081458,NM_001135001,NM_01202326931
83.147813.47496.0793
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0016765
(v1.0)
Ppp2r5cNM_001081457,NM_001081458,NM_001135001,NM_01202326931
61.864424.166921.8765
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0016765
(v1.0)
Ppp2r5cFR056625,FR216134,FR242013,FR272800,NM_001081457,NM_001081458,NM_001135001,NM_01202326931
104.632132.529
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0016765
(v1.0)
Ppp2r5cNM_001081457,NM_001081458,NM_001135001,NM_01202326931
76.764526.1818
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0016765
(v1.0)
Ppp2r5cNM_001081457,NM_001081458,NM_001135001,NM_01202326931
44.814347.7309
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0016765
(v1.0)
1328C0199E11-3Ppp2r5c26931
U014409NAP004730-0012700063L20Rik;Ppp2r5c;TC819534Q60996U,F,23.60123.61563.27363.32863.14733.26533.2853
0016765
(v1.0)
10709H3102E02-3Mm.3785Ppp2r5c26931
U014409NAP008727-0012700063L20Rik;Ppp2r5c;TC819532Q60996U,F,23.02482.83542.78082.58212.85272.73622.775
0016765
(v1.0)
17584K0648E01-3Ppp2r5c26931
U014409NAP004730-0012700063L20Rik;Ppp2r5c;TC819534Q60996U,F,23.52673.25912.85682.97382.79432.91923.0012
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0016765
(v1.0)
1425542_a_atMm.458056Ppp2r5c26931
540.675642.91156.675135.9285.575
0016765
(v1.0)
1427003_atMm.458056Ppp2r5c26931
466833.45875.3250151.85
0016765
(v1.0)
1434205_atMm.458056Ppp2r5c26931
504.4608.775768.975122.775211.875
0016765
(v1.0)
1455520_atMm.458056Ppp2r5c26931
1623.6251168.71249.7480.1250
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0016765
(v1.0)
A_51_P320523Ppp2r5cNM_01202326931
11P0.6640.157P
Proteome N/A