DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0016779
GenePpp6c
Synonyms
Desc.protein phosphatase 6, catalytic subunit
LocusNM_024209 chr2:39052318-39081858(-)
DB links


Entrez 67857
MGI 1915107
Ensembl ENSMUSG00000026753
Vega OTTMUSG00000012451
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2017272
(v2.0)
Ppp6cNM_02420967857
19.205810.05518.525236.672973.654424.483516.810412.841457.886824.2811
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0016779
(v1.0)
Ppp6c67857
MGA0.98304
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2017272
(v2.0)
Ppp6c67857
457/3110.0423381/3110.176162/3111.2424230/3110.890673/311-0.0327391/311-0.2681
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2017272
(v2.0)
Ppp6c67857
212/1210.294172/1210.388455/1212.3517206/1212.076222/121-0.3863107/121-0.7683
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2017272
(v2.0)
Ppp6c67857
25.38238928.52
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2017272
(v2.0)
Ppp6c67857
6.97545512.68
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0016779
(v1.0)
Ppp6cNM_02420967857
10.44912.744827.284751.137711.947
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0016779
(v1.0)
Ppp6cNM_02420967857
16.420620.282845.9446101.57820.8285
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0016779
(v1.0)
Ppp6cNM_02420967857
10.92547.0237413.9048
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0016779
(v1.0)
Ppp6cNM_02420967857
10.664212.61689.50627
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0016779
(v1.0)
Ppp6cNM_02420967857
21.143617.4036
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0016779
(v1.0)
Ppp6cNM_02420967857
10.93176.9275410.4262
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0016779
(v1.0)
Ppp6cNM_02420967857
25.261449.375539.7821
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0016779
(v1.0)
Ppp6cNM_02420967857
100.47768.3591
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0016779
(v1.0)
Ppp6cNM_02420967857
11.281828.5853
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0016779
(v1.0)
Ppp6cNM_02420967857
7.105635.49947
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0016779
(v1.0)
6746H3034A03-3Mm.253452310003C10Rik67857
1.90032.24882.40411.8051.97521.9612.0292
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0016779
(v1.0)
1424346_atMm.389242Ppp6cNM_024209.267857
136.675234.125216.025410.375195.65
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0016779
(v1.0)
A_51_P256282Ppp6cNM_02420967857
11P0.8160.291P
0016779
(v1.0)
A_52_P204440Ppp6cAK04685967857
11P0.9940.977P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0016779
(v1.0)
Ppp6c67857
221241