DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0016821
GenePrdm2
SynonymsKMT8
LOC381568
Riz
Riz1
Desc.PR domain containing 2, with ZNF domain
LocusNM_001081355 chr4:142697294-142802612(-)
NM_001256380 chr4:142717372-142802612(-)
DB links


Entrez 110593
MGI 107628
Ensembl ENSMUSG00000057637
Vega OTTMUSG00000010119
Featureprotein-coding
GO(BP)
  •   1 Terms
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2017314
(v2.0)
Prdm2NM_001081355,NM_001256380110593
9.1814615.550916.590722.841923.86988.285978.5066515.702121.58568.0242
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0016821
(v1.0)
Prdm2110593
Major ZGA0.98073
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2017314
(v2.0)
Prdm2110593
668/4150.1735454/4150.0133170/4152.2804405/4151.290935/415-1.4837461/415-0.4464
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2017314
(v2.0)
Prdm2110593
336/1760.418228/1760.2559165/1763.4205377/1762.413613/176-1.628116/176-1.1903
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2017314
(v2.0)
Prdm2110593
52.448213140.04
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2017314
(v2.0)
Prdm2110593
13.76589015.3
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0016821
(v1.0)
Prdm2NM_001081355110593
15.725211.153716.309715.1535.20261
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0016821
(v1.0)
Prdm2FR016250,FR288722,FR315647,FR373897,NM_001081355110593
86.302252.891175.722279.58223.3073
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0016821
(v1.0)
Prdm2NM_001081355110593
16.44213.1776212.1689
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0016821
(v1.0)
Prdm2NM_001081355110593
16.049211.041711.3821
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0016821
(v1.0)
Prdm2FR016250,FR288722,FR315647,FR373897,NM_001081355110593
73.263943.0435
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0016821
(v1.0)
Prdm2NM_001081355110593
16.45173.134112.4835
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0016821
(v1.0)
Prdm2NM_001081355110593
15.100314.630913.6893
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0016821
(v1.0)
Prdm2FR016250,FR288722,FR315647,FR373897,NM_001081355110593
61.48462.2292
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0016821
(v1.0)
Prdm2NM_001081355110593
31.074215.2147
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0016821
(v1.0)
Prdm2NM_001081355110593
1.075661.22406
NIA60mer N/A
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0016821
(v1.0)
1429251_atMm.332020Prdm2NM_001081355.3110593
2302.3251698.151222.751979.4752841.9
0016821
(v1.0)
1444123_atMm.332020Prdm2NM_001081355.3110593
00231.775292.975245.65
Agilent44K N/A
Proteome N/A