DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0016831
GenePrdx5
SynonymsAOEB166
AOPP
peroxiredoxin V
PMP20
Prdx6
PrxV
Desc.peroxiredoxin 5
LocusNM_012021 chr19:6981309-6984135(-)
DB links


Entrez 54683
MGI 1859821
Ensembl ENSMUSG00000024953
Vega OTTMUSG00000021180
Featureprotein-coding
GO(BP)
  •   13 Terms
      response to oxidative stress (GO:0006979)
      negative regulation of transcription from RNA polymerase III promoter (GO:0016480)
      positive regulation of collagen biosynthetic process (GO:0032967)
      cellular response to reactive oxygen species (GO:0034614)
      hydrogen peroxide catabolic process (GO:0042744)
      negative regulation of apoptotic process (GO:0043066)
      negative regulation of cysteine-type endopeptidase activity involved in apoptotic process (GO:0043154)
      negative regulation of oxidoreductase activity (GO:0051354)
      oxidation-reduction process (GO:0055114)
      regulation of apoptosis involved in tissue homeostasis (GO:0060785)
      NADPH oxidation (GO:0070995)
      reactive nitrogen species metabolic process (GO:2001057)
      regulation of RNA biosynthetic process (GO:2001141)
GO(MF)
GO(CC)
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2017324
(v2.0)
Prdx5NM_01202154683
358.7528.86839.6768445.335450.110945.734375.149610.17158.931762.618
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0016831
(v1.0)
Prdx554683
Major ZGA0.91735
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2017324
(v2.0)
Prdx554683
951/5620.2457404/562-0.5911154/5621.7119457/5621.029610/562-3.6279118/562-2.8353
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2017324
(v2.0)
Prdx554683
374/2080.3322158/208-0.5099138/2082.9378421/2082.33465/208-3.086333/208-3.1976
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2017324
(v2.0)
Prdx554683
102.83117857.77
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2017324
(v2.0)
Prdx554683
21.2529223.1
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0016831
(v1.0)
Prdx5NM_01202154683
30.01456.8064733.805834.855753.3091
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0016831
(v1.0)
Prdx5NM_01202154683
80.033815.2268124.225106.627136.975
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0016831
(v1.0)
Prdx5NM_01202154683
31.3829131.1997.42601
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0016831
(v1.0)
Prdx5NM_01202154683
30.63286.738137.56339
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0016831
(v1.0)
Prdx5NM_01202154683
22.891227.1576
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0016831
(v1.0)
Prdx5NM_01202154683
31.4012129.4028.29527
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0016831
(v1.0)
Prdx5NM_01202154683
31.298933.654540.8482
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0016831
(v1.0)
Prdx5NM_01202154683
108.012104.514
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0016831
(v1.0)
Prdx5NM_01202154683
7.7369119.7976
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0016831
(v1.0)
Prdx5NM_01202154683
25.44128.67715
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0016831
(v1.0)
11276H3111A02-3Prdx554683
Prdx53.29523.36193.41813.67423.61173.69293.6451
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0016831
(v1.0)
1416381_a_atMm.279782Prdx5NM_012021.254683
404.90265.55624.65573.4
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0016831
(v1.0)
A_51_P174591Prdx5NM_01202154683
11P0.8480.433P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0016831
(v1.0)
Prdx554683
12138.67324436