DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0016954
GenePrpf18
Synonyms
Desc.PRP18 pre-mRNA processing factor 18 homolog (yeast)
LocusNM_026045 chr2:4543213-4573132(-)
DB links


Entrez 67229
MGI 1914479
Ensembl ENSMUSG00000039449
Vega OTTMUSG00000010793
Featureprotein-coding
GO(BP)
GO(MF)
  •   1 Terms
      potassium channel inhibitor activity (GO:0019870)
GO(CC)
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2017450
(v2.0)
Prpf18NM_02604567229
7.3629426.616752.684130.913335.70279.1865618.880747.824831.319.52855
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0016954
(v1.0)
Prpf1867229
1-Cell Transient0.90592
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2017450
(v2.0)
Prpf1867229
604/3960.096454/3960.0808105/3961.6561362/3961.196683/396-0.1943553/396-0.1173
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2017450
(v2.0)
Prpf1867229
290/1770.1984202/1770.07474/1772.2666230/1771.695121/177-0.9839143/177-0.9
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2017450
(v2.0)
Prpf1867229
57.668710853.4
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2017450
(v2.0)
Prpf1867229
12.34435920.92
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0016954
(v1.0)
Prpf18NM_02604567229
27.656236.564423.021424.757413.3031
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0016954
(v1.0)
Prpf18NM_02604567229
56.261352.986440.123839.884224.0606
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0016954
(v1.0)
Prpf18NM_02604567229
28.9172.692739.8926
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0016954
(v1.0)
Prpf18NM_02604567229
28.225936.197335.4253
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0016954
(v1.0)
Prpf18NM_02604567229
85.906793.9831
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0016954
(v1.0)
Prpf18NM_02604567229
28.93392.6558238.8533
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0016954
(v1.0)
Prpf18NM_02604567229
21.314223.904221.5935
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0016954
(v1.0)
Prpf18NM_02604567229
56.235157.3354
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0016954
(v1.0)
Prpf18NM_02604567229
9.968868.08558
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0016954
(v1.0)
Prpf18NM_02604567229
3.293714.79552
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0016954
(v1.0)
3066C0507D12-3Mm.385292810441A10Rik67229
U043836NAP001121-0012810441A10Rik;TC909561Q9CYU9U,F,23.3863.46663.04233.33073.44613.51223.3995
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0016954
(v1.0)
1429614_atMm.38529Prpf18NM_026045.367229
617.475681.375651.875849.8633.95
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0016954
(v1.0)
A_51_P148597Prpf18NM_02604567229
11P0.5790.116P
0016954
(v1.0)
A_52_P206881Prpf18NM_02604567229
11P0.730.196P
Proteome N/A