DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0016962
GenePrpf40a
SynonymsFBP11
Fnbp3
DescriptionPRP40 pre-mRNA processing factor 40 homolog A (yeast)
LocusNM_018785 UCSC: chr2:52997509-53050221(-) OLP: chr2:52997509-53050221(-)
DB links


Entrez 56194
MGI 1860512
Ensembl ENSMUSG00000061136
Vega OTTMUSG00000012447
Featureprotein-coding
GO_BP
GO_MF
GO_CC
KEGG
Ver2_FPKM see DBTMEE:2017458 (v2.0)
SPR_Histone_Erkek_5KaroundTSS N/A
SPR_Histone_Erkek_2KaroundTSS N/A
SPR_Methy_Kobayashi_5KaroundTSS N/A
SPR_Methy_Kobayashi_2KaroundTSS N/A
SOLiD_OocyteTo4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0016962
(v1.0)		Prpf40aNM_01878556194
34.303840.681665.760974.586624.6219
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0016962
(v1.0)		Prpf40aNM_01878556194
35.86785.4131544.3845
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0016962
(v1.0)		Prpf40aNM_01878556194
35.010540.273127.2402
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0016962
(v1.0)		Prpf40aNM_01878556194
35.88865.3390129.8762
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0016962
(v1.0)		Prpf40aNM_01878556194
60.884372.016460.9591
Illumina_Oo_2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0016962
(v1.0)		Prpf40aNM_01878556194
25.451782.02
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0016962
(v1.0)		Prpf40aNM_01878556194
37.30239.8753
NIA60mer
DBTMEEArray_Feature_NumberOligo_Parent_CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0016962
(v1.0)		2204C0301F11-3Mm.87658Fnbp356194
U022635NAP092860-001Fnbp3;TC847699Q61049U,F,23.9674.30454.70834.27494.06214.45754.1873
0016962
(v1.0)		5780H3009A08-3Mm.87658Fnbp356194
U022635NAP092860-001Fnbp3;TC847699Q61049U,F,23.64933.60263.13543.41363.35193.28553.4079
0016962
(v1.0)		6138H3018D11-3Mm.87658Fnbp356194
U022635NAP092860-001Fnbp3;TC847699,TC847698Q61049U,F,23.43763.2783.16313.16623.36863.19333.351
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0016962
(v1.0)		1420916_atMm.257474Prpf40aNM_018785.256194
90.57598.1579.47585.47568.875
0016962
(v1.0)		1442171_atMm.257474Prpf40aNM_018785.256194
95.975.82500120.375
0016962
(v1.0)		1429436_atMm.257474Prpf40aNM_018785.256194
0212.30108.525115.775
Agilent44K
DBTMEEProbe_IDGeneAccEntrezOo1_xFoldOo1_pValOo1_FlagOo2_xFoldOo2_pValOo2_Flag
0016962
(v1.0)		A_51_P193446Fnbp3NM_01878556194
11P1.2590.323P
0016962
(v1.0)		A_52_P158576Fnbp3NM_01878556194
11P1.1360.423P
Proteome N/A