DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0017048
GenePrune
SynonymsPrune-M1
Desc.prune homolog (Drosophila)
LocusNM_173347 chr3:95057596-95085998(-)
DB links


Entrez 229589
MGI 1925152
Ensembl ENSMUSG00000015711
Vega OTTMUSG00000022362
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
KEGG
  •   1 Terms
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2017549
(v2.0)
PruneNM_173347229589
10.525958.699278.965729.141621.739217.37917.9547487.690522.238816.5329
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0017048
(v1.0)
Prune229589
Minor ZGA0.98023
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2017549
(v2.0)
Prune229589
830/4650.3224562/4650.15681200/4654.93282745/4653.885526/465-2.0613162/465-2.1103
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2017549
(v2.0)
Prune229589
436/1780.7763284/1780.55521084/1786.11372288/1784.995812/178-1.750983/178-1.682
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2017549
(v2.0)
Prune229589
66.08218535.72
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2017549
(v2.0)
Prune229589
11.48071219.49
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0017048
(v1.0)
PruneNM_173347229589
61.027254.769821.698315.0885.62492
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0017048
(v1.0)
PruneFR187352,NM_173347229589
58.804958.841439.775222.12785.31579
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0017048
(v1.0)
PruneNM_173347229589
63.80953.8494459.7551
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0017048
(v1.0)
PruneNM_173347229589
62.284454.219964.9587
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0017048
(v1.0)
PruneFR187352,NM_173347229589
47.902859.6066
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0017048
(v1.0)
PruneNM_173347229589
63.84663.7967171.2445
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0017048
(v1.0)
PruneNM_173347229589
20.089314.56815.4122
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0017048
(v1.0)
PruneFR187352,NM_173347229589
13.413614.3236
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0017048
(v1.0)
PruneNM_173347229589
59.800417.9915
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0017048
(v1.0)
PruneNM_173347229589
17.856519.6774
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0017048
(v1.0)
10050H3090B12-3PRUNEM1229589
PRUNEM1TC8006482.76512.60992.79982.66923.01942.81852.8683
0017048
(v1.0)
14861J0901A11-3Mm.14155PRUNEM1229589
U024360NAP003456-002TC800650,TC800648U,F,23.80523.73243.36043.75113.99263.81334.0382
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0017048
(v1.0)
1434138_atMm.14155PruneNM_173347.2229589
264.025263.6154.1250120.55
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0017048
(v1.0)
A_52_P132507PruneNM_173347229589
11P0.8590.383P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0017048
(v1.0)
Prune229589
9134181910