DBTMEE

DBTMEE
Database of Transcriptome in Mouse Early Embryos

DBTMEE:0017048

Gene

Prune

Synonyms

Prune-M1

Description

prune homolog (Drosophila)

Locus

NM_173347 UCSC: chr3:95057596-95085998(-) OLP: chr3:95057596-95085998(-)

DB links

Entrez 229589
MGI 1925152
Ensembl ENSMUSG00000015711
Vega OTTMUSG00000022362

Feature

protein-coding

GO_BP

GO_MF

5 Terms

GO_CC

3 Terms

KEGG

1 Terms

see DBTMEE:2017549 (v2.0)

SPR_Histone_Erkek_5KaroundTSS

N/A

SPR_Histone_Erkek_2KaroundTSS

N/A

SPR_Methy_Kobayashi_5KaroundTSS

N/A

SPR_Methy_Kobayashi_2KaroundTSS

N/A

SOLiD_OocyteTo4C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	SPR_FPKM	Oo_FPKM	1C_FPKM	2C_FPKM	4C_FPKM	MEF_FPKM
0017048 (v1.0)	Prune	NM_173347	229589	61.0272	54.7698	21.6983	15.088	5.62492

SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	SPR_FPKM	1C_FPKM
0017048 (v1.0)	Prune	NM_173347	229589	63.8095	3.84944	59.7551

SOLiD_Partheno1C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	1C_FPKM	p1C_FPKM
0017048 (v1.0)	Prune	NM_173347	229589	62.2844	54.2199	64.9587

SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	SPR_FPKM	p1C_FPKM
0017048 (v1.0)	Prune	NM_173347	229589	63.8466	3.79671	71.2445

SOLiD_Partheno4C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	2C_FPKM	4C_FPKM	p4C_FPKM
0017048 (v1.0)	Prune	NM_173347	229589	20.0893	14.568	15.4122

Illumina_Oo_2C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	2C_FPKM
0017048 (v1.0)	Prune	NM_173347	229589	59.8004	17.9915

SOLiD_SC_Oo_REPLICA_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_1_1	Oo_2_1
0017048 (v1.0)	Prune	NM_173347	229589	17.8565	19.6774

DBTMEE	Array_Feature_Number	Oligo_Parent_Clone	Unigene	Gene	Entrez	U_Cluster	NAP_Cluster	Gene_U/NAP	TIGR	SwissProt	EST	Oo	1C	2C	4C	8C	Morula	Blastocyst
0017048 (v1.0)	10050	H3090B12-3		PRUNEM1	229589			PRUNEM1	TC800648			2.7651	2.6099	2.7998	2.6692	3.0194	2.8185	2.8683
0017048 (v1.0)	14861	J0901A11-3	Mm.14155	PRUNEM1	229589	U024360	NAP003456-002		TC800650,TC800648		U,F,2	3.8052	3.7324	3.3604	3.7511	3.9926	3.8133	4.0382

DBTMEE	Probe_ID	Unigene	Gene	RefSeq	Entrez	Oo	1C	2C	8C	Blastocyst
0017048 (v1.0)	1434138_at	Mm.14155	Prune	NM_173347.2	229589	264.025	263.6	154.125	0	120.55

DBTMEE	Probe_ID	Gene	Acc	Entrez	Oo1_xFold	Oo1_pVal	Oo1_Flag	Oo2_xFold	Oo2_pVal	Oo2_Flag
0017048 (v1.0)	A_52_P132507	Prune	NM_173347	229589	1	1	P	0.859	0.383	P

DBTMEE	Gene	Entrez	GV_seqCount	MII_seqCount	Zygote_seqCount	GV_specCount	MII_specCount	Zygote_specCount
0017048 (v1.0)	Prune	229589	9	13	4	18	19	10