DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0017059
GenePsen1
SynonymsAd3h
presenilin-1
PS-1
PS1
S182
Desc.presenilin 1
LocusNM_008943 chr12:85029513-85076149(+)
DB links


Entrez 19164
MGI 1202717
Ensembl ENSMUSG00000019969
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2017560
(v2.0)
Psen1NM_00894319164
36.777741.227351.49927.894588.794818.9005211.046170.732213.32389.09967
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0017059
(v1.0)
Psen119164
Maternal RNA0.95452
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2017560
(v2.0)
Psen119164
599/3830.1321448/3830.1097265/3833.0302663/3832.115712/383-2.838668/383-3.0651
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2017560
(v2.0)
Psen119164
284/1580.3313213/1580.3129259/1584.2129639/1583.32664/158-2.961632/158-2.8455
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2017560
(v2.0)
Psen119164
64.86615242.68
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2017560
(v2.0)
Psen119164
14.795810014.8
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0017059
(v1.0)
Psen1NM_00894319164
42.855735.585.873966.09197.67394
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0017059
(v1.0)
Psen1NM_00894319164
74.827665.769712.84737.7667214.7035
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0017059
(v1.0)
Psen1NM_00894319164
44.809513.4538.8185
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0017059
(v1.0)
Psen1NM_00894319164
43.738535.222752.3605
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0017059
(v1.0)
Psen1NM_00894319164
66.778661.8662
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0017059
(v1.0)
Psen1NM_00894319164
44.835613.265757.4272
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0017059
(v1.0)
Psen1NM_00894319164
5.438375.881979.22668
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0017059
(v1.0)
Psen1NM_00894319164
15.099740.0313
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0017059
(v1.0)
Psen1NM_00894319164
119.096.63384
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0017059
(v1.0)
Psen1NM_00894319164
2.04160.497976
NIA60mer N/A
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0017059
(v1.0)
1450399_atMm.998Psen1NM_008943.219164
307.2250315.67500
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0017059
(v1.0)
A_51_P464576Psen1NM_00894319164
1 (0.921 to 1.092)1P1.085 (0.99 to 1.263)0.0697P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0017059
(v1.0)
Psen119164
602802