DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0017081
GenePsma4
SynonymsC9
Desc.proteasome (prosome, macropain) subunit, alpha type 4
LocusNM_011966 chr9:54798666-54805837(+)
DB links


Entrez 26441
MGI 1347060
Ensembl ENSMUSG00000032301
Vega OTTMUSG00000036073
Featureprotein-coding
GO(BP)
  •   3 Terms
      proteolysis (GO:0006508)
      ubiquitin-dependent protein catabolic process (GO:0006511)
      proteolysis involved in cellular protein catabolic process (GO:0051603)
GO(MF)
GO(CC)
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2017582
(v2.0)
Psma4NM_01196626441
70.5548114.753104.408164.51278.35293.759179.06990.3946304.587355.3
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0017081
(v1.0)
Psma426441
MGA0.97907
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2017582
(v2.0)
Psma426441
684/4310.1532435/431-0.102665/4310.8539178/4310.055266/431-0.6415403/431-0.6942
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2017582
(v2.0)
Psma426441
319/1480.5919170/1480.083261/1482.2321159/1481.419414/148-1.284893/148-1.256
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2017582
(v2.0)
Psma426441
62.711812350.99
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2017582
(v2.0)
Psma426441
17.9825333.93
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0017081
(v1.0)
Psma4NM_01196626441
119.25672.1966122.515193.158127.205
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0017081
(v1.0)
Psma4NM_01196626441
102.30661.4531127.718187.495134.111
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0017081
(v1.0)
Psma4NM_01196626441
124.69325.802678.7681
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0017081
(v1.0)
Psma4NM_01196626441
121.71271.471766.8725
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0017081
(v1.0)
Psma4NM_01196626441
957.782967.589
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0017081
(v1.0)
Psma4NM_01196626441
124.76525.449273.3435
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0017081
(v1.0)
Psma4NM_01196626441
113.43186.502210.439
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0017081
(v1.0)
Psma4NM_01196626441
547.051652.025
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0017081
(v1.0)
Psma4NM_01196626441
242.223140.153
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0017081
(v1.0)
Psma4NM_01196626441
35.149740.0812
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0017081
(v1.0)
6944H3039C02-3Mm.30270Psma426441
U010515NAP097830-001TC908913,TC908912,TC867370Q9R1P0U,F,22.82612.79973.12733.42653.36133.51783.5687
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0017081
(v1.0)
1460339_atMm.30270Psma4NM_011966.326441
1124.3598.525709.31117.31589.675
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0017081
(v1.0)
A_51_P106227Psma4NM_01196626441
11P0.6540.248P
0017081
(v1.0)
A_52_P81468Psma4NM_01196626441
11P0.5150.102P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0017081
(v1.0)
Psma426441
3925147