DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0017083
GenePsma6
Synonyms
Desc.proteasome (prosome, macropain) subunit, alpha type 6
LocusNM_011968 chr12:56499812-56519446(+)
DB links


Entrez 26443
MGI 1347006
Ensembl ENSMUSG00000021024
Vega OTTMUSG00000034926
Featureprotein-coding
GO(BP)
  •   5 Terms
      proteolysis (GO:0006508)
      ubiquitin-dependent protein catabolic process (GO:0006511)
      skeletal muscle tissue development (GO:0007519)
      positive regulation of NF-kappaB transcription factor activity (GO:0051092)
      proteolysis involved in cellular protein catabolic process (GO:0051603)
GO(MF)
GO(CC)
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2017584
(v2.0)
Psma6NM_01196826443
305.085105.36153.7111238.441410.41389.850885.378459.5656363.704109.07
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0017083
(v1.0)
Psma626443
Major ZGA0.97027
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2017584
(v2.0)
Psma626443
631/3820.2107421/3820.024120/3821.8974373/3821.291337/382-1.2874213/382-1.4356
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2017584
(v2.0)
Psma626443
316/1960.1754190/196-0.1602108/1962.6679341/1962.11612/196-1.886874/196-1.9827
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2017584
(v2.0)
Psma626443
58.554413543.37
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2017584
(v2.0)
Psma626443
15.71477620.68
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0017083
(v1.0)
Psma6NM_01196826443
109.4837.1746177.507283.98561.562
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0017083
(v1.0)
Psma6NM_01196826443
295.65564.0469327.652461.743174.66
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0017083
(v1.0)
Psma6NM_01196826443
114.471111.57340.5583
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0017083
(v1.0)
Psma6NM_01196826443
111.73536.801344.095
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0017083
(v1.0)
Psma6NM_01196826443
108.539192.584
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0017083
(v1.0)
Psma6NM_01196826443
114.538110.04548.3619
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0017083
(v1.0)
Psma6NM_01196826443
164.344274.199251.58
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0017083
(v1.0)
Psma6NM_01196826443
873.0061335.9
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0017083
(v1.0)
Psma6NM_01196826443
102.646225.189
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0017083
(v1.0)
Psma6NM_01196826443
23.32211.9655
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0017083
(v1.0)
6139H3018D12-3Mm.30210Psma626443
U013964NAP011372-001Psma6;TC919096,TC919093,TC919089,TC919087Q9QUM9U,F,23.15933.34353.88464.3214.24134.3924.2992
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0017083
(v1.0)
1416506_atMm.30210Psma6NM_011968.326443
1107.975336.825721.92478.051743.1
0017083
(v1.0)
1437144_x_atMm.30210Psma6NM_011968.326443
2296.8707.5752388.8256083.33943.325
Agilent44K N/A
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0017083
(v1.0)
Psma626443
356467