DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0017086
GenePsmb1
SynonymsLmpc5
Desc.proteasome (prosome, macropain) subunit, beta type 1
LocusNM_011185 chr17:15612685-15635240(-)
DB links


Entrez 19170
MGI 104884
Ensembl ENSMUSG00000014769
Featureprotein-coding
GO(BP)
  •   2 Terms
GO(MF)
GO(CC)
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2017587
(v2.0)
Psmb1NM_01118519170
104.83531.82227.0490393.7172183.222104.25210.26110.0327157.442124.558
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0017086
(v1.0)
Psmb119170
MGA0.98935
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2017587
(v2.0)
Psmb119170
743/4120.3372561/4120.3284247/4122.8269795/4122.27268/412-3.4733107/412-2.5276
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2017587
(v2.0)
Psmb119170
384/1860.5306254/1860.3317226/1863.7973666/1863.15434/186-3.191451/186-2.4316
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2017587
(v2.0)
Psmb119170
55.456818729.66
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2017587
(v2.0)
Psmb119170
13.028412410.51
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0017086
(v1.0)
Psmb1NM_01118519170
33.06654.8790469.794127.306148.04
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0017086
(v1.0)
Psmb1NM_01118519170
31.08644.5788566.5735144.74147.765
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0017086
(v1.0)
Psmb1NM_01118519170
34.574138.33915.32314
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0017086
(v1.0)
Psmb1NM_01118519170
33.74774.830057.43275
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0017086
(v1.0)
Psmb1NM_01118519170
3.789075.65709
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0017086
(v1.0)
Psmb1NM_01118519170
34.594237.8148.15199
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0017086
(v1.0)
Psmb1NM_01118519170
64.6183122.919109.005
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0017086
(v1.0)
Psmb1NM_01118519170
126.02597.9832
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0017086
(v1.0)
Psmb1NM_01118519170
20.962552.9451
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0017086
(v1.0)
Psmb1NM_01118519170
1.381583.11066
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0017086
(v1.0)
1221C0188E08-3Mm.42197Psmb119170
U037449NAP098715-001Psmb1;TC908794,TC908787,TC908786O09061U,F,23.10122.9693.52433.88053.49443.7663.667
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0017086
(v1.0)
1448166_a_atMm.32912Psmb1NM_011185.319170
774.950310.325839.31085.1
0017086
(v1.0)
1420052_x_atMm.32912Psmb1NM_011185.319170
33.22500055.525
Agilent44K N/A
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0017086
(v1.0)
Psmb119170
67691415