DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0017091
GenePsmb4
SynonymsPros-27
Desc.proteasome (prosome, macropain) subunit, beta type 4
LocusNM_008945 chr3:94688246-94690880(-)
DB links


Entrez 19172
MGI 1098257
Ensembl ENSMUSG00000005779
Vega OTTMUSG00000019673
Featureprotein-coding
GO(BP)
  •   3 Terms
      negative regulation of inflammatory response to antigenic stimulus (GO:0002862)
      proteolysis (GO:0006508)
      proteolysis involved in cellular protein catabolic process (GO:0051603)
GO(MF)
GO(CC)
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2017592
(v2.0)
Psmb4NM_00894519172
181.72877.48199.22282140.293274.894372.593141.8210.9529258.964439.844
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0017091
(v1.0)
Psmb419172
MGA0.94698
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2017592
(v2.0)
Psmb419172
602/446-0.0799401/446-0.26993/4461.316214/4460.270580/446-0.4167472/446-0.5162
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2017592
(v2.0)
Psmb419172
286/212-0.0805169/212-0.440885/2122.2191193/2121.186333/212-0.6107162/212-0.9808
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2017592
(v2.0)
Psmb419172
73.795913853.48
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2017592
(v2.0)
Psmb419172
17.11737622.52
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0017091
(v1.0)
Psmb4NM_00894519172
80.54836.42276104.481190.828101.21
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0017091
(v1.0)
Psmb4FR276478,NM_00894519172
314.80928.7691579.382961.796401.438
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0017091
(v1.0)
Psmb4NM_00894519172
84.220766.45967.00737
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0017091
(v1.0)
Psmb4NM_00894519172
82.20776.358278.14398
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0017091
(v1.0)
Psmb4FR276478,NM_00894519172
10.179423.9484
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0017091
(v1.0)
Psmb4NM_00894519172
84.269665.54948.93204
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0017091
(v1.0)
Psmb4NM_00894519172
96.7335184.252178.984
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0017091
(v1.0)
Psmb4FR276478,NM_00894519172
854.009734.714
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0017091
(v1.0)
Psmb4NM_00894519172
17.811367.7621
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0017091
(v1.0)
Psmb4NM_00894519172
7.993334.92027
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0017091
(v1.0)
976C0170D11-3Mm.368Psmb419172
U024344NAP007256-001Psmb4;TC868541,TC868540P99026U,F,23.49743.46854.06354.62464.46194.6114.598
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0017091
(v1.0)
1451205_atMm.368Psmb4NM_008945.319172
1448.85287.35695.1252304.053303.6
0017091
(v1.0)
1438984_x_atMm.368Psmb4NM_008945.319172
617.697.1370.251000.175898.525
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0017091
(v1.0)
A_51_P155522Psmb4NM_00894519172
11P0.380.0654P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0017091
(v1.0)
Psmb419172
5749169