DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0017106
GenePsmd11
SynonymsC78232
P44.5
S9
Desc.proteasome (prosome, macropain) 26S subunit, non-ATPase, 11
LocusNM_178616 chr11:80242117-80285635(+)
DB links


Entrez 69077
MGI 1916327
Ensembl ENSMUSG00000017428
Vega OTTMUSG00000000212
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2017607
(v2.0)
Psmd11NM_17861669077
29.978362.446388.9524115.296201.48229.6167109.78684.6357192.63936.8854
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0017106
(v1.0)
Psmd1169077
MGA0.98755
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2017607
(v2.0)
Psmd1169077
569/3000.4095351/3000.1196/3001.915280/3001.224863/300-0.1909499/3000.1343
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2017607
(v2.0)
Psmd1169077
322/1400.6849174/1400.196291/1402.8754263/1402.220724/140-0.4699154/140-0.458
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2017607
(v2.0)
Psmd1169077
44.560711439.09
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2017607
(v2.0)
Psmd1169077
9.06627212.59
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0017106
(v1.0)
Psmd11NM_17861669077
64.901761.588785.8395139.79377.7148
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0017106
(v1.0)
Psmd11NM_17861669077
245.605219.749379.169561.672400.942
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0017106
(v1.0)
Psmd11NM_17861669077
67.860610.963467.1946
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0017106
(v1.0)
Psmd11NM_17861669077
66.238760.970362.7185
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0017106
(v1.0)
Psmd11NM_17861669077
540.174646.466
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0017106
(v1.0)
Psmd11NM_17861669077
67.900110.813268.7875
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0017106
(v1.0)
Psmd11NM_17861669077
79.474134.976133.046
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0017106
(v1.0)
Psmd11NM_17861669077
114.33144.734
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0017106
(v1.0)
Psmd11NM_17861669077
16.336943.8706
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0017106
(v1.0)
Psmd11NM_17861669077
47.096759.1911
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0017106
(v1.0)
17637L0003B07-3Mm.28571Psmd1169077
U013055NAP092226-001TC830458,TC830446,TC830444U,F,23.49593.50173.74853.86163.95223.90483.813
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0017106
(v1.0)
1429370_a_atMm.260539Psmd11NM_178616.369077
218.75481.5384.15560.475483.05
0017106
(v1.0)
1437080_s_atMm.260539Psmd11NM_178616.369077
1741.8253206.0752777.83494.652754.25
0017106
(v1.0)
1456059_atMm.260539Psmd11NM_178616.369077
216.075290400.175606.55638.3
0017106
(v1.0)
1440253_atMm.260539Psmd11NM_178616.369077
233.65110.575227.15374.55278.4
0017106
(v1.0)
1456104_atMm.260539Psmd11NM_178616.369077
070.7068.0750
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0017106
(v1.0)
A_52_P370353Psmd11NM_17861669077
11P0.910.518P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0017106
(v1.0)
Psmd1169077
773784