DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0017181
GenePtma
SynonymsThym
Desc.prothymosin alpha
LocusNM_008972 chr1:88423311-88427273(+)
DB links


Entrez 19231
MGI 97803
Ensembl ENSMUSG00000026238
Featureprotein-coding
GO(BP)
  •   2 Terms
      negative regulation of apoptotic process (GO:0043066)
      negative regulation of cysteine-type endopeptidase activity involved in apoptotic process (GO:0043154)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2017687
(v2.0)
PtmaNM_00897219231
533.56453.918763.8901510.051799.84106.81987.10150.36811675.874930.3
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0017181
(v1.0)
Ptma19231
MGA0.98109
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2017687
(v2.0)
Ptma19231
989/4640.578403/464-0.3188312/4642.9959963/4642.378426/464-2.0582199/464-1.8129
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2017687
(v2.0)
Ptma19231
619/1831.2407222/1830.1617275/1834.1013798/1833.43794/183-3.168470/183-1.9627
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2017687
(v2.0)
Ptma19231
44.486327116.42
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2017687
(v2.0)
Ptma19231
6.97382163.23
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0017181
(v1.0)
PtmaNM_00897219231
56.0344.248379.5611247.19694.232
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0017181
(v1.0)
PtmaNM_00897219231
11.32516.6912352.2249133.82369.2403
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0017181
(v1.0)
PtmaNM_00897219231
58.5845195.1348.2756
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0017181
(v1.0)
PtmaNM_00897219231
57.184343.803737.3994
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0017181
(v1.0)
PtmaNM_00897219231
6.795243.12814
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0017181
(v1.0)
PtmaNM_00897219231
58.6186192.45741.0184
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0017181
(v1.0)
PtmaNM_00897219231
351.4141204.211159.52
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0017181
(v1.0)
PtmaNM_00897219231
132.384142.249
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0017181
(v1.0)
PtmaNM_00897219231
275.878165.154
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0017181
(v1.0)
PtmaNM_00897219231
1.48127.91551
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0017181
(v1.0)
5291X56135.1Mm.19187Ptma19231
U000542NAP095048-001TC835326,TC835321,TC835320,TC835306,TC835301,TC835299,TC835278,TC835274,TC835271,TC835270P26350U,F,23.18193.05643.63784.5544.45724.50154.335
0017181
(v1.0)
17904L0031A12-3Mm.19187Ptma19231
U000542NAP095048-001TC835326,TC835321,TC835320,TC835306,TC835301,TC835299,TC835278,TC835274,TC835271,TC835270P26350U,F,23.18973.05923.66074.56334.47424.52134.344
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0017181
(v1.0)
1423455_atMm.19187PtmaNM_008972.219231
580.275581.81636.058035.154953.6
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0017181
(v1.0)
A_51_P249227PtmaNM_00897219231
11P0.4350.0769P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0017181
(v1.0)
Ptma19231
313314