DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0017186
GenePtp4a2
SynonymsPrl-2
Desc.protein tyrosine phosphatase 4a2
LocusNM_008974 chr4:129497723-129527247(+)
NM_001164745 chr4:129497952-129527247(+)
DB links


Entrez 19244
MGI 1277117
Ensembl ENSMUSG00000028788
Vega OTTMUSG00000009511
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2017692
(v2.0)
Ptp4a2NM_001164745,NM_00897419244
86.8242103.025158.547157.205147.4475.171554.8984122.999111.04982.328
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0017186
(v1.0)
Ptp4a219244
Major ZGA0.96685
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2017692
(v2.0)
Ptp4a219244
646/4270.0843396/427-0.2244179/4272.3144524/4271.62097/427-3.694398/427-2.704
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2017692
(v2.0)
Ptp4a219244
346/1690.5184197/1690.1044164/1693.4665474/1692.80092/169-3.793241/169-2.5988
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2017692
(v2.0)
Ptp4a219244
62.568415041.71
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2017692
(v2.0)
Ptp4a219244
14.13369215.36
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0017186
(v1.0)
Ptp4a2NM_001164745,NM_00897419244
107.048109.631117.079102.24438.8316
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0017186
(v1.0)
Ptp4a2FR078287,FR308973,NM_001164745,NM_00897419244
92.68589.6129100.41286.275333.8963
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0017186
(v1.0)
Ptp4a2NM_001164745,NM_00897419244
111.92931.7533119.61
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0017186
(v1.0)
Ptp4a2NM_001164745,NM_00897419244
109.254108.5390.931
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0017186
(v1.0)
Ptp4a2FR078287,FR308973,NM_001164745,NM_00897419244
90.064472.9116
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0017186
(v1.0)
Ptp4a2NM_001164745,NM_00897419244
111.99431.318499.7301
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0017186
(v1.0)
Ptp4a2NM_001164745,NM_00897419244
108.39798.720776.5182
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0017186
(v1.0)
Ptp4a2FR078287,FR308973,NM_001164745,NM_00897419244
75.499861.5812
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0017186
(v1.0)
Ptp4a2NM_001164745,NM_00897419244
86.233670.7433
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0017186
(v1.0)
Ptp4a2NM_001164745,NM_00897419244
183.15183.598
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0017186
(v1.0)
11881H3126D09-3Mm.6355Ptp4a219244
U004875NAP120946-001Ptp4a2;TC885861,TC885858,TC885853,TC885848O70274U,F,24.62184.64574.14774.55224.40794.51944.4493
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0017186
(v1.0)
1460707_atMm.193688Ptp4a2NM_008974.4,NM_001164745.119244
302.225797.225690.125232.8267.9
0017186
(v1.0)
1420612_s_atMm.193688Ptp4a2NM_008974.4,NM_001164745.119244
52.75122.8588.9027.825
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0017186
(v1.0)
A_51_P346516Ptp4a2NM_00897419244
11P0.4430.0776P
0017186
(v1.0)
A_52_P276607Ptp4a2NM_00897419244
11P0.6180.13P
0017186
(v1.0)
A_52_P585448Ptp4a2NM_00897419244
11P0.4280.0769P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0017186
(v1.0)
Ptp4a219244
200300