DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0017190
GenePtplad1
SynonymsB-ind1
Hspc121
Desc.protein tyrosine phosphatase-like A domain containing 1
LocusNM_021345 chr9:64834790-64869524(-)
DB links


Entrez 57874
MGI 1889341
Ensembl ENSMUSG00000033629
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2017696
(v2.0)
Ptplad1NM_02134557874
17.8168.9939715.774851.977748.079711.862119.6399.7535639.390311.8759
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0017190
(v1.0)
Ptplad157874
Major ZGA0.99076
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2017696
(v2.0)
Ptplad157874
737/4750.1207549/4750.0925728/4754.18272405/4753.664348/475-1.2319372/475-0.9491
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2017696
(v2.0)
Ptplad157874
340/1900.3252262/1900.3457635/1905.25481785/1904.54510/190-2.0839125/190-1.1936
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2017696
(v2.0)
Ptplad157874
73.229913853.07
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2017696
(v2.0)
Ptplad157874
21.11658225.75
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0017190
(v1.0)
Ptplad1NM_02134557874
9.3455810.946738.675733.418113.9299
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0017190
(v1.0)
Ptplad1NM_02134557874
210.434243.71986.68192056.2434.841
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0017190
(v1.0)
Ptplad1NM_02134557874
9.771666.515511.943
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0017190
(v1.0)
Ptplad1NM_02134557874
9.5381110.83677.22352
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0017190
(v1.0)
Ptplad1NM_02134557874
12.3998.55135
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0017190
(v1.0)
Ptplad1NM_02134557874
9.777346.426267.92252
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0017190
(v1.0)
Ptplad1NM_02134557874
35.807632.266527.1586
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0017190
(v1.0)
Ptplad1NM_02134557874
78.871380.53
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0017190
(v1.0)
Ptplad1NM_02134557874
6.08336.884
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0017190
(v1.0)
Ptplad1NM_02134557874
0.7033561.00335
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0017190
(v1.0)
12860H3153F07-3Mm.21092Hspc121-pending57874
U031001NAP005807-001Hspc121;TC919532O090033.3293.43183.76913.70943.41813.47413.4333
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0017190
(v1.0)
1452427_s_atMm.478475Ptplad1NM_021345.257874
57.275.97584.872.62547.125
0017190
(v1.0)
1433706_a_atMm.478475Ptplad1NM_021345.257874
343.1224.25776.950470.65
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0017190
(v1.0)
A_52_P641892AW742319NM_02134557874
11P0.5650.11P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0017190
(v1.0)
Ptplad157874
140160