DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0017195
GenePtpn11
SynonymsPTP1D
PTP2C
SH-PTP2
SH2 domain-containing protein tyrosine phosphatase-2
SHP-2
Shp2
Syp
Desc.protein tyrosine phosphatase, non-receptor type 11
LocusNM_011202 chr5:121580542-121641406(-)
NM_001109992 chr5:121580542-121641406(-)
DB links


Entrez 19247
MGI 99511
Ensembl ENSMUSG00000043733
Vega OTTMUSG00000016267
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
KEGG
  •   7 Terms
      Jak-STAT signaling pathway (mmu04630)
      Natural killer cell mediated cytotoxicity (mmu04650)
      Leukocyte transendothelial migration (mmu04670)
      Neurotrophin signaling pathway (mmu04722)
      Adipocytokine signaling pathway (mmu04920)
      Renal cell carcinoma (mmu05211)
      Chronic myeloid leukemia (mmu05220)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2017701
(v2.0)
Ptpn11NM_001109992,NM_01120219247
28.185653.3994136.43795.171752.199514.739337.2295147.13261.647114.0548
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0017195
(v1.0)
Ptpn1119247
Minor ZGA0.99242
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2017701
(v2.0)
Ptpn1119247
640/4230.0844385/423-0.2514126/4231.8244312/4230.888245/423-1.1573346/423-0.8863
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2017701
(v2.0)
Ptpn1119247
314/1410.6386162/1410.0835116/1413.2128275/1412.27478/141-1.953877/141-1.4542
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2017701
(v2.0)
Ptpn1119247
80.484715751.26
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2017701
(v2.0)
Ptpn1119247
16.5568918.6
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0017195
(v1.0)
Ptpn11NM_001109992,NM_01120219247
55.51494.683970.838936.16426.2259
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0017195
(v1.0)
Ptpn11NM_001109992,NM_01120219247
412.95604.51514.848268.21109.64
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0017195
(v1.0)
Ptpn11NM_001109992,NM_01120219247
58.04510.3078103.302
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0017195
(v1.0)
Ptpn11NM_001109992,NM_01120219247
56.657693.7332109.108
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0017195
(v1.0)
Ptpn11NM_001109992,NM_01120219247
1889.642027.27
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0017195
(v1.0)
Ptpn11NM_001109992,NM_01120219247
58.078710.1666119.666
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0017195
(v1.0)
Ptpn11NM_001109992,NM_01120219247
65.585834.917842.7514
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0017195
(v1.0)
Ptpn11NM_001109992,NM_01120219247
475.225590.047
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0017195
(v1.0)
Ptpn11NM_001109992,NM_01120219247
52.312335.3975
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0017195
(v1.0)
Ptpn11NM_001109992,NM_01120219247
26.521622.3435
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0017195
(v1.0)
10730H3102G07-3Mm.220855Ptpn1119247
U026679NAP007805-001Ptpn11;TC859916,TC859915P35235U,F,23.52753.51123.31443.66683.45853.38353.4148
0017195
(v1.0)
14127J0412C05-3Mm.8681AW536184100974
U026679NAP019588-001Ptpn11;TC815100P35235U,F,23.78013.97324.05833.88223.6083.74113.5892
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0017195
(v1.0)
1451225_atMm.8681Ptpn11NM_011202.3,NM_001109992.119247
940.61335.451252.65298.125474.325
0017195
(v1.0)
1427699_a_atMm.8681Ptpn11NM_011202.3,NM_001109992.119247
00171.6500
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0017195
(v1.0)
A_51_P173622Ptpn11NM_01120219247
11P0.9010.487P
0017195
(v1.0)
A_52_P641185Ptpn11NM_01120219247
11P1.1070.495P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0017195
(v1.0)
Ptpn1119247
592.57132.5