DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0017202
GenePtpn21
SynonymsPTPD1
PTPRL10
Desc.protein tyrosine phosphatase, non-receptor type 21
LocusNM_001146199 chr12:99914951-99975615(-)
NM_011877 chr12:99914951-99972855(-)
DB links


Entrez 24000
MGI 1344406
Ensembl ENSMUSG00000021009
Featureprotein-coding
GO(BP)
GO(MF)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2017708
(v2.0)
Ptpn21NM_001146199,NM_01187724000
1.93544161.776144.38148.912351.71843.716844.16463170.08838.8042.74353
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0017202
(v1.0)
Ptpn2124000
Maternal RNA0.99528
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2017708
(v2.0)
Ptpn2124000
630/4340.0248461/434-0.0291184/4342.3311603/4341.7998369/4341.81381595/4341.2765
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2017708
(v2.0)
Ptpn2124000
292/1710.2578208/1710.165551/1711.7847238/1711.7932258/1712.622930/1711.8378
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2017708
(v2.0)
Ptpn2124000
65.840421131.2
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2017708
(v2.0)
Ptpn2124000
18.10248720.81
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0017202
(v1.0)
Ptpn21NM_001146199,NM_01187724000
168.24499.856936.38235.79332.85783
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0017202
(v1.0)
Ptpn21NM_001146199,NM_01187724000
2148.811208.88443.097428.37914.2744
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0017202
(v1.0)
Ptpn21NM_001146199,NM_01187724000
175.9150.707811108.946
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0017202
(v1.0)
Ptpn21NM_001146199,NM_01187724000
171.7198.8543126.123
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0017202
(v1.0)
Ptpn21NM_001146199,NM_01187724000
403.839482.032
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0017202
(v1.0)
Ptpn21NM_001146199,NM_01187724000
176.0170.698116138.327
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0017202
(v1.0)
Ptpn21NM_001146199,NM_01187724000
33.68434.559826.9456
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0017202
(v1.0)
Ptpn21NM_001146199,NM_01187724000
240.337144.909
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0017202
(v1.0)
Ptpn21NM_001146199,NM_01187724000
231.03342.068
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0017202
(v1.0)
Ptpn21NM_001146199,NM_01187724000
71.577282.7943
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0017202
(v1.0)
8774H3072A01-3Mm.4420Ptpn2124000
U034250NAP093939-001Ptpn21;TC849022,TC849021Q62136U,F,23.333.13532.9813.45753.09272.92072.9465
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0017202
(v1.0)
1419054_a_atMm.4420Ptpn21NM_011877.2,NM_001146199.124000
501.11027.45238.4215.6750
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0017202
(v1.0)
A_51_P450740Ptpn21NM_01187724000
11P1.3640.198P
0017202
(v1.0)
A_52_P329825Ptpn21NM_01187724000
11P1.2850.242P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0017202
(v1.0)
Ptpn2124000
020020