DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0017210
GenePtpn9
SynonymsMeg2
Desc.protein tyrosine phosphatase, non-receptor type 9
LocusNM_019651 chr9:56842775-56910614(+)
DB links


Entrez 56294
MGI 1928376
Ensembl ENSMUSG00000032290
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2017716
(v2.0)
Ptpn9NM_01965156294
9.913273.058356.6543413.204719.37593.1154119.67238.613119.36393.18159
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0017210
(v1.0)
Ptpn956294
MGA0.97509
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2017716
(v2.0)
Ptpn956294
629/3130.4927367/3130.1131145/3132.446404/3131.691537/313-1.0034221/313-1.0962
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2017716
(v2.0)
Ptpn956294
407/1480.9419211/1480.3931131/1483.3223332/1482.47697/148-2.191797/148-1.1962
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2017716
(v2.0)
Ptpn956294
22.409411319.83
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2017716
(v2.0)
Ptpn956294
8.7116978.98
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0017210
(v1.0)
Ptpn9NM_01965156294
3.178964.594659.821613.428613.8923
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0017210
(v1.0)
Ptpn9FR393635,NM_01965156294
14.328629.554670.956272.45561.6878
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0017210
(v1.0)
Ptpn9NM_01965156294
3.323893.625385.01286
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0017210
(v1.0)
Ptpn9NM_01965156294
3.244454.548516.3792
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0017210
(v1.0)
Ptpn9FR393635,NM_01965156294
55.1749112.629
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0017210
(v1.0)
Ptpn9NM_01965156294
3.325833.575736.99649
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0017210
(v1.0)
Ptpn9NM_01965156294
9.0932712.965913.39
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0017210
(v1.0)
Ptpn9FR393635,NM_01965156294
71.907676.6197
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0017210
(v1.0)
Ptpn9NM_01965156294
1.992447.6533
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0017210
(v1.0)
Ptpn9NM_01965156294
0.3260360.154207
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0017210
(v1.0)
2751C0358F03-3Mm.6678Ptpn956294
U010535NAP099037-001Ptpn9;TC836596O352392.84463.02873.12063.14862.73922.76622.8272
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0017210
(v1.0)
1451037_atMm.325643Ptpn9NM_019651.256294
70.571.4593.8585.62544.9
Agilent44K N/A
Proteome N/A