DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0017243
GenePum1
SynonymsPumm
Desc.pumilio 1 (Drosophila)
LocusNM_001159606 chr4:130219274-130337479(+)
NM_001159605 chr4:130219274-130337479(+)
NM_030722 chr4:130219274-130337479(+)
NM_001159604 chr4:130219274-130337479(+)
NM_001159603 chr4:130219274-130337479(+)
DB links


Entrez 80912
MGI 1931749
Ensembl ENSMUSG00000028580
Vega OTTMUSG00000009596
Featureprotein-coding
GO(BP)
  •   1 Terms
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2017750
(v2.0)
Pum1NM_001159603,NM_001159604,NM_001159605,NM_001159606,NM_03072280912
10.95927.678329.8662255.511883.753316.143715.51558.5118358.531215.3068
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0017243
(v1.0)
Pum180912
MGA0.98265
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2017750
(v2.0)
Pum180912
638/3730.2609437/3730.112327/3733.3694866/3732.538432/373-1.4569274/373-1.0403
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2017750
(v2.0)
Pum180912
364/1680.5997245/1680.4259313/1684.4028785/1683.535911/168-1.784994/168-1.4226
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2017750
(v2.0)
Pum180912
33.845212427.29
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2017750
(v2.0)
Pum180912
10.9189012.13
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0017243
(v1.0)
Pum1NM_001159603,NM_001159604,NM_001159605,NM_001159606,NM_03072280912
7.954756.7671541.28457.903710.7636
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0017243
(v1.0)
Pum1NM_001159603,NM_001159604,NM_001159605,NM_001159606,NM_03072280912
30.290215.116897.687165.58534.0601
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0017243
(v1.0)
Pum1NM_001159603,NM_001159604,NM_001159605,NM_001159606,NM_03072280912
8.317424.007897.38311
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0017243
(v1.0)
Pum1NM_001159603,NM_001159604,NM_001159605,NM_001159606,NM_03072280912
8.118626.69926.30526
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0017243
(v1.0)
Pum1NM_001159603,NM_001159604,NM_001159605,NM_001159606,NM_03072280912
35.01274.3324
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0017243
(v1.0)
Pum1NM_001159603,NM_001159604,NM_001159605,NM_001159606,NM_03072280912
8.322253.952996.91539
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0017243
(v1.0)
Pum1NM_001159603,NM_001159604,NM_001159605,NM_001159606,NM_03072280912
38.222655.908440.3995
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0017243
(v1.0)
Pum1NM_001159603,NM_001159604,NM_001159605,NM_001159606,NM_03072280912
109.5974.6458
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0017243
(v1.0)
Pum1NM_001159603,NM_001159604,NM_001159605,NM_001159606,NM_03072280912
4.3925110.4365
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0017243
(v1.0)
Pum1NM_001159603,NM_001159604,NM_001159605,NM_001159606,NM_03072280912
1.565681.12609
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0017243
(v1.0)
604C0120D05-3Mm.34701Pum180912
U004886NAP094920-001Pum1;TC793234,TC793228,TC793226Q9EPU6U,F,23.29083.19273.17293.39813.3083.37473.4541
0017243
(v1.0)
14940J0914D04-3Mm.34701Pum180912
U004886NAP094920-001Pum1;TC793226Q9EPU6U,F,23.06562.93613.23943.68253.31143.50963.4415
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0017243
(v1.0)
1456054_a_atMm.440206Pum1NM_030722.2,NM_001159604.1,NM_001159603.1,NM_001159605.1,NM_001159606.180912
71.025146.375235.65504.45342.25
0017243
(v1.0)
1460325_atMm.440206Pum1NM_030722.2,NM_001159604.1,NM_001159603.1,NM_001159605.1,NM_001159606.180912
0065.5107.4587.875
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0017243
(v1.0)
A_51_P423219Pum1NM_03072280912
11P1.2750.252P
Proteome N/A