DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0017258
GenePvrl3
Synonymsnectin-3
Desc.poliovirus receptor-related 3
LocusNM_021496 chr16:46394971-46497080(-)
NM_021497 chr16:46436092-46497080(-)
NM_021495 chr16:46447274-46497080(-)
DB links


Entrez 58998
MGI 1930171
Ensembl ENSMUSG00000022656
Vega OTTMUSG00000014968
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
KEGG
  •   2 Terms
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2017765
(v2.0)
Pvrl3NM_021495,NM_021496,NM_02149758998
17.993969.184261.642927.095411.567712.59356.3282557.452616.772515.7051
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0017258
(v1.0)
Pvrl358998
Maternal RNA0.94443
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2017765
(v2.0)
Pvrl358998
934/3940.731679/3940.6677688/3944.36362291/3943.8624273/3941.51861768/3941.5641
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2017765
(v2.0)
Pvrl358998
546/1781.0999350/1780.8557636/1785.34531733/1784.5952122/1781.4912902/1781.7362
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2017765
(v2.0)
Pvrl358998
59.409616935.15
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2017765
(v2.0)
Pvrl358998
12.019911510.45
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0017258
(v1.0)
Pvrl3NM_021495,NM_021496,NM_02149758998
76.903343.571223.64358.924194.94325
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0017258
(v1.0)
Pvrl3FR131585,FR292111,NM_021495,NM_021496,NM_02149758998
263.197135.88467.080233.662215.6555
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0017258
(v1.0)
Pvrl3NM_021495,NM_021496,NM_02149758998
80.40948.4976847.5371
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0017258
(v1.0)
Pvrl3NM_021495,NM_021496,NM_02149758998
78.487643.133743.9156
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0017258
(v1.0)
Pvrl3FR131585,FR292111,NM_021495,NM_021496,NM_02149758998
183.051178.716
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0017258
(v1.0)
Pvrl3NM_021495,NM_021496,NM_02149758998
80.45628.3812948.1652
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0017258
(v1.0)
Pvrl3NM_021495,NM_021496,NM_02149758998
21.89028.6166613.1237
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0017258
(v1.0)
Pvrl3FR131585,FR292111,NM_021495,NM_021496,NM_02149758998
41.214265.3263
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0017258
(v1.0)
Pvrl3NM_021495,NM_021496,NM_02149758998
52.20810.0076
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0017258
(v1.0)
Pvrl3NM_021495,NM_021496,NM_02149758998
10.82516.9837
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0017258
(v1.0)
365C0102H12-3Mm.46724Pvrl358998
U037085NAP095582-001Pvrl3;TC799970Q9D006U,F,22.4142.55292.31092.21291.88231.90632.1197
0017258
(v1.0)
5427AF195834.1Mm.46724Pvrl358998
U037085NAP016451-001Pvrl3;TC799973,TC799969Q9D006U,F,22.63072.58012.48652.58222.69572.61862.6114
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0017258
(v1.0)
1448673_atMm.328072Pvrl3NM_021495.3,NM_021497.2,NM_021496.258998
993.6726.3539.325051.3
0017258
(v1.0)
1423331_a_atMm.328072Pvrl3NM_021495.3,NM_021497.2,NM_021496.258998
436.3414.1276.27500
0017258
(v1.0)
1421132_atMm.328072Pvrl3NM_021495.3,NM_021497.2,NM_021496.258998
89.585.975000
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0017258
(v1.0)
A_51_P125009Pvrl3NM_02149558998
11P0.7830.247P
0017258
(v1.0)
A_52_P15490Pvrl3NM_02149658998
11P0.3250.0671P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0017258
(v1.0)
Pvrl358998
100100