DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0017305
GeneR3hdm1
Synonyms
Desc.R3H domain containing 1
LocusNM_181750 chr1:129999883-130134312(+)
DB links


Entrez 226412
MGI 2448514
Ensembl ENSMUSG00000056211
Featureprotein-coding
GO(BP)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2017815
(v2.0)
R3hdm1NM_181750226412
14.69225.0439310.397512.40238.5713110.26443.257688.2288111.367110.6084
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0017305
(v1.0)
R3hdm1226412
Minor ZGA0.78337
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2017815
(v2.0)
R3hdm1226412
653/3950.2119471/3950.1373231/3952.7897571/3951.856323/395-1.9981196/395-1.6029
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2017815
(v2.0)
R3hdm1226412
305/1610.4067203/1610.217224/1613.9791550/1613.08393/161-3.3149/161-2.2806
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2017815
(v2.0)
R3hdm1226412
34.641111031.49
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2017815
(v2.0)
R3hdm1226412
6.7988798.61
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0017305
(v1.0)
R3hdm1NM_181750226412
5.241717.165159.251675.969462.20816
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0017305
(v1.0)
R3hdm1FR140995,NM_181750226412
10.728822.589954.11774.4639.63125
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0017305
(v1.0)
R3hdm1NM_181750226412
5.480695.37317.81734
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0017305
(v1.0)
R3hdm1NM_181750226412
5.349697.093216.08872
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0017305
(v1.0)
R3hdm1NM_181750226412
243.213233.588
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0017305
(v1.0)
R3hdm1NM_181750226412
5.483875.299516.67791
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0017305
(v1.0)
R3hdm1NM_181750226412
8.56565.763757.88892
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0017305
(v1.0)
R3hdm1NM_181750226412
95.711873.3074
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0017305
(v1.0)
R3hdm1NM_181750226412
35.206768.4371
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0017305
(v1.0)
R3hdm1NM_181750226412
5.996429.5984
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0017305
(v1.0)
7938H3056G05-3Mm.24109LOC226412226412
U000758NAP001912-003TC893365U,F,23.52053.65383.70513.94453.2933.35633.2599
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0017305
(v1.0)
1433871_atMm.221041R3hdm1NM_181750.2226412
486.325510.2251570.675674.875258.3
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0017305
(v1.0)
A_51_P219361R3hdmNM_181750226412
11P0.6450.244P
0017305
(v1.0)
A_52_P669141R3hdmNM_181750226412
11P0.9290.696P
Proteome N/A