DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0017312
GeneRab11a
Synonyms
Desc.RAB11a, member RAS oncogene family
LocusNM_017382 chr9:64563107-64585563(-)
DB links


Entrez 53869
MGI 1858202
Ensembl ENSMUSG00000004771
Vega OTTMUSG00000036848
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
KEGG
  •   4 Terms
      Endocytosis (mmu04144)
      Endocrine and other factor-regulated calcium reabsorption (mmu04961)
      Vasopressin-regulated water reabsorption (mmu04962)
      Pancreatic secretion (mmu04972)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2017823
(v2.0)
Rab11aNM_01738253869
22.9869109.229138.82155.233945.024728.428235.9224107.64341.970729.4571
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0017312
(v1.0)
Rab11a53869
Maternal RNA0.95575
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2017823
(v2.0)
Rab11a53869
647/3410.4101450/3410.2832160/3412.4679391/3411.521841/341-0.981190/341-1.4359
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2017823
(v2.0)
Rab11a53869
352/1660.5687199/1660.1446156/1663.4189370/1662.469810/166-1.893656/166-2.1372
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2017823
(v2.0)
Rab11a53869
45.682412935.41
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2017823
(v2.0)
Rab11a53869
10.84719111.92
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0017312
(v1.0)
Rab11aNM_01738253869
113.48895.762641.143331.198225.1652
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0017312
(v1.0)
Rab11aNM_01738253869
140.303107.43947.652737.00229.8118
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0017312
(v1.0)
Rab11aNM_01738253869
118.6628.40655104.479
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0017312
(v1.0)
Rab11aNM_01738253869
115.82694.801179.8066
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0017312
(v1.0)
Rab11aNM_01738253869
109.11492.0088
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0017312
(v1.0)
Rab11aNM_01738253869
118.7318.2914187.5292
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0017312
(v1.0)
Rab11aNM_01738253869
38.092330.123129.0222
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0017312
(v1.0)
Rab11aNM_01738253869
36.602435.6507
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0017312
(v1.0)
Rab11aNM_01738253869
27.677922.5942
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0017312
(v1.0)
Rab11aNM_01738253869
37.789768.5362
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0017312
(v1.0)
10647H3101E12-3Mm.1387Rab11a53869
3.1932.9072.63062.49042.61622.53072.5757
0017312
(v1.0)
10792H3103F06-3Mm.1387Rab11a53869
U030998NAP004641-001Rab11a;TC892221,TC892219Q9JLX1U,F,23.25473.29953.21573.27183.2143.35173.4683
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0017312
(v1.0)
1449256_a_atMm.1387Rab11aNM_017382.553869
1334.85932.775335.975372.0251056.075
0017312
(v1.0)
1434549_atMm.1387Rab11aNM_017382.553869
283.725519.025445.3560.7580.3
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0017312
(v1.0)
A_51_P277505Rab11aNM_01738253869
11P0.6830.163P
0017312
(v1.0)
A_52_P389310Rab11aAK03114353869
11P0.6320.145P
0017312
(v1.0)
A_52_P444162Rab11aNM_01738253869
11P0.4160.0853P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0017312
(v1.0)
Rab11a53869
767331614