DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0017324
GeneRab18
Synonyms
Desc.RAB18, member RAS oncogene family
LocusNM_181070 chr18:6765203-6790229(+)
DB links


Entrez 19330
MGI 102790
Ensembl ENSMUSG00000073639
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2017837
(v2.0)
Rab18NM_001278447,NM_18107019330
18.92715.849834.521816.692113.98235.439124.952519.105112.141133.5676
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0017324
(v1.0)
Rab1819330
1-Cell Transient0.96783
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2017837
(v2.0)
Rab1819330
601/3500.2665454/3500.2585178/3502.5845295/3501.079251/350-0.71292/350-0.8574
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2017837
(v2.0)
Rab1819330
282/1390.5047231/1390.613178/1393.8452279/1392.315721/139-0.6443104/139-1.0073
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2017837
(v2.0)
Rab1819330
31.19336051.99
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2017837
(v2.0)
Rab1819330
8.19843622.77
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0017324
(v1.0)
Rab18NM_18107019330
27.697140.151920.751715.984129.3474
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0017324
(v1.0)
Rab18FR091101,NM_18107019330
62.658589.244948.156140.5969.8121
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0017324
(v1.0)
Rab18NM_18107019330
28.959911.593843.8066
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0017324
(v1.0)
Rab18NM_18107019330
28.267739.748723.7724
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0017324
(v1.0)
Rab18FR091101,NM_18107019330
317.484103.514
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0017324
(v1.0)
Rab18NM_18107019330
28.976711.43526.0728
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0017324
(v1.0)
Rab18NM_18107019330
19.212915.433313.788
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0017324
(v1.0)
Rab18FR091101,NM_18107019330
128.303119.987
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0017324
(v1.0)
Rab18NM_18107019330
16.67898.6074
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0017324
(v1.0)
Rab18NM_18107019330
30.932246.1451
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0017324
(v1.0)
6194H3020C05-3Mm.132802Rab1819330
U038186NAP123773-1P35293U,F3.24063.08912.49562.53462.98733.04063.2078
0017324
(v1.0)
10711H3102E05-5Rab1819330
U018378NAP121929-001Rab18;TC804390,TC804386P35293U,F2.05442.32442.08761.91082.06451.92932.4584
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0017324
(v1.0)
1420899_atMm.132802Rab18NM_181070.519330
32.22582.90042.225
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0017324
(v1.0)
A_51_P215496Rab18NM_01122519330
11P0.3640.0794P
0017324
(v1.0)
A_52_P327615Rab18NM_18107019330
11P1.0190.879P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0017324
(v1.0)
Rab1819330
111112