DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0017326
GeneRab1b
Synonyms
Desc.RAB1B, member RAS oncogene family
LocusNM_029576 chr19:5099207-5106996(-)
DB links


Entrez 76308
MGI 1923558
Ensembl ENSMUSG00000024870
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2017839
(v2.0)
Rab1bNM_02957676308
102.8944.466782.45728.9261124.105963.023455.560393.222922.198177.8657
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0017326
(v1.0)
Rab1b76308
Minor ZGA0.9471
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2017839
(v2.0)
Rab1b76308
824/595-0.043399/595-0.6912142/5951.5151621/5951.389223/595-2.5841242/595-1.8907
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2017839
(v2.0)
Rab1b76308
316/2160.0359149/216-0.648177/2162.0527301/2161.79812/216-4.139762/216-2.3719
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2017839
(v2.0)
Rab1b76308
120.225519262.62
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2017839
(v2.0)
Rab1b76308
32.96310232.32
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0017326
(v1.0)
Rab1bNM_02957676308
46.237857.44756.6422116.752239.4226
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0017326
(v1.0)
Rab1bNM_02957676308
136.026128.91114.893353.3621112.257
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0017326
(v1.0)
Rab1bNM_02957676308
48.345837.628162.6765
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0017326
(v1.0)
Rab1bNM_02957676308
47.190356.870769.091
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0017326
(v1.0)
Rab1bNM_02957676308
173.618250.582
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0017326
(v1.0)
Rab1bNM_02957676308
48.373937.112775.7767
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0017326
(v1.0)
Rab1bNM_02957676308
6.1496516.17515.3658
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0017326
(v1.0)
Rab1bNM_02957676308
194.534159.31
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0017326
(v1.0)
Rab1bNM_02957676308
10.03872.44193
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0017326
(v1.0)
Rab1bNM_02957676308
1.731540.727976
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0017326
(v1.0)
6431H3025A10-3Mm.1825631110011F09Rik76308
U019065NAP006827-0011110011F09Rik;TC886489,TC886484Q9D1G12.80583.11192.94453.08613.24753.38163.4586
0017326
(v1.0)
20875L0817E02-31110011F09Rik76308
3.87883.69143.87753.69374.45164.04674.3532
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0017326
(v1.0)
1424064_atMm.182563Rab1bNM_029576.376308
000090.875
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0017326
(v1.0)
A_51_P344950Rab1bNM_02957676308
11P0.910.529P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0017326
(v1.0)
Rab1b76308
685102315