DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0017330
GeneRab23
Synonyms
Desc.RAB23, member RAS oncogene family
LocusNM_008999 chr1:33776741-33799409(+)
NM_001159729 chr1:33777264-33799409(+)
DB links


Entrez 19335
MGI 99833
Ensembl ENSMUSG00000004768
Vega OTTMUSG00000021871
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
KEGG
  •   1 Terms
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2017843
(v2.0)
Rab23NM_001159729,NM_00899919335
2.935738.746798.513597.171955.119266.180178.724110.10037.190776.74002
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0017330
(v1.0)
Rab2319335
Maternal RNA0.98236
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2017843
(v2.0)
Rab2319335
688/4380.1384420/438-0.1763105/4381.5148241/4380.4671119/4380.1762758/4380.1915
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2017843
(v2.0)
Rab2319335
404/2000.4994239/2000.140197/2002.4869222/2001.470352/2000.1121280/200-0.1133
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2017843
(v2.0)
Rab2319335
84.184315753.62
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2017843
(v2.0)
Rab2319335
15.37587819.71
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0017330
(v1.0)
Rab23NM_001159729,NM_00899919335
9.081195.880975.332133.552826.18409
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0017330
(v1.0)
Rab23NM_001159729,NM_00899919335
21.692511.649910.74148.8231714.4385
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0017330
(v1.0)
Rab23NM_001159729,NM_00899919335
9.495221.073626.41626
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0017330
(v1.0)
Rab23NM_001159729,NM_00899919335
9.268275.821927.45868
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0017330
(v1.0)
Rab23NM_001159729,NM_00899919335
13.024216.4418
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0017330
(v1.0)
Rab23NM_001159729,NM_00899919335
9.500741.058918.18043
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0017330
(v1.0)
Rab23NM_001159729,NM_00899919335
4.936723.430394.97268
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0017330
(v1.0)
Rab23NM_001159729,NM_00899919335
8.7279412.0801
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0017330
(v1.0)
Rab23NM_001159729,NM_00899919335
19.95926.17626
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0017330
(v1.0)
Rab23NM_001159729,NM_00899919335
8.9370212.4857
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0017330
(v1.0)
1315C0197B06-3Mm.86744Rab2319335
U042150NAP037342-1Rab23;TC899029P35288U,F,23.88333.77722.45842.54262.32392.4322.3755
0017330
(v1.0)
6256H3022A05-3Rab2319335
U042150NAP001301-002Rab23;TC899029P35288U,F,22.5822.72122.64992.73782.45772.56462.4036
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0017330
(v1.0)
1452113_a_atMm.86744Rab23NM_008999.4,NM_001159729.119335
222.10000
0017330
(v1.0)
1454876_atMm.86744Rab23NM_008999.4,NM_001159729.119335
298.55522.375000
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0017330
(v1.0)
A_51_P344668Rab23NM_00899919335
11P2.1820.0894P
0017330
(v1.0)
A_52_P623538Rab23NM_00899919335
11P1.3920.195P
Proteome N/A