DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0017337
GeneRab2a
SynonymsRab2
Desc.RAB2A, member RAS oncogene family
LocusNM_021518 chr4:8462791-8534849(+)
DB links


Entrez 59021
MGI 1928750
Ensembl ENSMUSG00000047187
Vega OTTMUSG00000004419
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2017852
(v2.0)
Rab2aNM_02151859021
69.812258.8027104.48740.29645.561742.672473.737170.986632.926544.7439
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0017337
(v1.0)
Rab2a59021
Minor ZGA0.97069
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2017852
(v2.0)
Rab2a59021
677/3890.2859504/3890.2568137/3892.0616275/3890.826991/389-0.0376567/389-0.0556
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2017852
(v2.0)
Rab2a59021
376/1640.6809252/1640.5009128/1643.1518241/1641.870612/164-1.6355129/164-0.9376
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2017852
(v2.0)
Rab2a59021
43.251610341.99
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2017852
(v2.0)
Rab2a59021
14.14686023.58
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0017337
(v1.0)
Rab2aNM_02151859021
61.082571.996829.967131.597151.8463
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0017337
(v1.0)
Rab2aNM_02151859021
187.189191.518126.08679.8307134.254
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0017337
(v1.0)
Rab2aNM_02151859021
63.867325.53178.55
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0017337
(v1.0)
Rab2aNM_02151859021
62.340871.273852.5614
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0017337
(v1.0)
Rab2aNM_02151859021
393.656331.765
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0017337
(v1.0)
Rab2aNM_02151859021
63.904425.181357.6476
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0017337
(v1.0)
Rab2aNM_02151859021
27.744930.508222.7216
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0017337
(v1.0)
Rab2aNM_02151859021
185.083190.921
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0017337
(v1.0)
Rab2aNM_02151859021
679.93758.9966
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0017337
(v1.0)
Rab2aNM_02151859021
31.840361.8116
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0017337
(v1.0)
1042C0174E08-3Mm.21905Rab259021
U004051NAP095540-001Rab2;TC863017P53994U,F,23.2863.17632.72362.72352.54362.80083.1313
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0017337
(v1.0)
1418621_atMm.397471Rab2aNM_021518.359021
503.925728.225292.725737.05934.475
0017337
(v1.0)
1419945_s_atMm.397471Rab2aNM_021518.359021
584.525955.825637.75185.15576.75
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0017337
(v1.0)
A_52_P303928Rab2NM_02151859021
11P1.0990.521P
0017337
(v1.0)
A_52_P611589Rab2NM_02151859021
11P0.0380.0199P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0017337
(v1.0)
Rab2a59021
8123203410