DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0017345
GeneRab35
SynonymsH-ray
RAB1C
Desc.RAB35, member RAS oncogene family
LocusNM_198163 chr5:116081996-116097167(+)
DB links


Entrez 77407
MGI 1924657
Ensembl ENSMUSG00000029518
Vega OTTMUSG00000014704
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2017860
(v2.0)
Rab35NM_19816377407
23.810155.953988.4460.742460.114228.295534.2829114.56154.504925.8814
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0017345
(v1.0)
Rab3577407
Minor ZGA0.95529
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2017860
(v2.0)
Rab3577407
791/4900.1777439/490-0.274199/4901.273300/4900.620961/490-0.9369429/490-0.789
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2017860
(v2.0)
Rab3577407
405/1920.5616213/1920.033483/1922.32261/1921.7618/192-2.388295/192-1.5991
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2017860
(v2.0)
Rab3577407
100.38116859.75
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2017860
(v2.0)
Rab3577407
20.488524.09
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0017345
(v1.0)
Rab35NM_19816377407
58.163261.300545.227341.686824.3289
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0017345
(v1.0)
Rab35NM_19816377407
201.343184.451130.862127.37157.8604
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0017345
(v1.0)
Rab35NM_19816377407
60.81498.707666.8802
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0017345
(v1.0)
Rab35NM_19816377407
59.361460.68584.9261
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0017345
(v1.0)
Rab35NM_19816377407
294.529417.965
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0017345
(v1.0)
Rab35NM_19816377407
60.85038.5883493.144
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0017345
(v1.0)
Rab35NM_19816377407
41.873440.250337.8356
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0017345
(v1.0)
Rab35NM_19816377407
102.901128.496
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0017345
(v1.0)
Rab35NM_19816377407
13.701914.2181
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0017345
(v1.0)
Rab35NM_19816377407
52.761418.2959
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0017345
(v1.0)
12154H3136E02-39530019H02Rik77407
U006054NAP008353-001TC826051U,F,23.42323.20773.09543.07483.71313.27543.5249
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0017345
(v1.0)
1433922_atMm.27553Rab35NM_198163.177407
433.425810.95792.70650.975
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0017345
(v1.0)
A_51_P354572Rab35NM_19816377407
11P1.7450.113P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0017345
(v1.0)
Rab3577407
100100