DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0017348
GeneRab38
Synonyms
Desc.RAB38, member of RAS oncogene family
LocusNM_028238 chr7:95578783-95640082(+)
DB links


Entrez 72433
MGI 1919683
Ensembl ENSMUSG00000030559
Vega OTTMUSG00000025016
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2017863
(v2.0)
Rab38NM_02823872433
1.08852264.909338.05941.7777.436663.199020.282717314.72817.81632.14171
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0017348
(v1.0)
Rab3872433
Maternal RNA0.9851
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2017863
(v2.0)
Rab3872433
639/3780.244454/3780.147729/378-0.0999177/3780.2352416/3782.18361738/3781.5991
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2017863
(v2.0)
Rab3872433
288/1550.3788183/1550.122622/1550.7398110/1550.8263258/1552.7602992/1552.0716
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2017863
(v2.0)
Rab3872433
28.96218135.76
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2017863
(v2.0)
Rab3872433
7.84265813.52
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0017348
(v1.0)
Rab38NM_02823872433
275.363234.10231.07565.153870.190046
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0017348
(v1.0)
Rab38NM_02823872433
330.717254.30635.15436.064020.216298
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0017348
(v1.0)
Rab38NM_02823872433
287.9180.398083255.41
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0017348
(v1.0)
Rab38NM_02823872433
281.036231.751233.089
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0017348
(v1.0)
Rab38NM_02823872433
258.237263.972
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0017348
(v1.0)
Rab38NM_02823872433
288.0850.392631255.644
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0017348
(v1.0)
Rab38NM_02823872433
28.77114.9762712.4238
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0017348
(v1.0)
Rab38NM_02823872433
5.998514.7656
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0017348
(v1.0)
Rab38NM_02823872433
291.90815.2861
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0017348
(v1.0)
Rab38NM_02823872433
6.321914.32304
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0017348
(v1.0)
14913J0905H12-3Mm.17985Rab3872433
Rab383.00332.67522.84942.66893.31292.99653.1287
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0017348
(v1.0)
1417700_atMm.276669Rab38NM_028238.772433
1566.35690.325413.557757.925
0017348
(v1.0)
1439628_x_atMm.276669Rab38NM_028238.772433
10837.453169.22620.5980.71162.25
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0017348
(v1.0)
A_52_P21595Rab38NM_02823872433
11P0.7770.276P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0017348
(v1.0)
Rab3872433
120230