DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0017375
GeneRab9
SynonymsSID 99
Desc.RAB9, member RAS oncogene family
LocusNM_019773 chrX:162895184-162917799(-)
DB links


Entrez 56382
MGI 1890695
Ensembl ENSMUSG00000079316
Vega OTTMUSG00000019544
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2017889
(v2.0)
Rab9NM_01977356382
16.257217.022422.659329.189925.568969.576436.906621.811129.923380.552
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0017375
(v1.0)
Rab956382
2-Cell Transient0.9088
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2017889
(v2.0)
Rab956382
369/2360.1315257/2360.0068334/2364.03411446/2363.932225/236-1.1496214/236-0.7364
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2017889
(v2.0)
Rab956382
137/860.1572109/860.2233135/864.0718534/863.92689/86-1.114840/86-1.6667
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2017889
(v2.0)
Rab956382
65.840112453.1
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2017889
(v2.0)
Rab956382
15.13215826.09
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0017375
(v1.0)
Rab9NM_01977356382
20.751518.384225.441320.703830.2627
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0017375
(v1.0)
Rab9NM_01977356382
15.4112.72617.943913.966320.9304
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0017375
(v1.0)
Rab9NM_01977356382
21.69766.941720.0576
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0017375
(v1.0)
Rab9NM_01977356382
21.17918.199618.8815
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0017375
(v1.0)
Rab9NM_01977356382
12.923812.8078
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0017375
(v1.0)
Rab9NM_01977356382
21.71026.8466320.7086
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0017375
(v1.0)
Rab9NM_01977356382
23.554719.990324.2944
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0017375
(v1.0)
Rab9NM_01977356382
13.815215.0962
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0017375
(v1.0)
Rab9NM_01977356382
24.591432.8526
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0017375
(v1.0)
Rab9NM_01977356382
31.954320.355
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0017375
(v1.0)
14953J0922G06-3Rab956382
Rab93.29763.33292.93853.14683.1613.19473.298
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0017375
(v1.0)
1448391_atMm.25306Rab9NM_019773.156382
263.325388.4419.9303.425839.425
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0017375
(v1.0)
A_52_P214678Rab9NM_01977356382
11P1.3280.215P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0017375
(v1.0)
Rab956382
100100