DBTMEE

DBTMEE
Database of Transcriptome in Mouse Early Embryos

DBTMEE:0017391

Gene

Rac1

Synonyms

D5Ertd559e

Description

RAS-related C3 botulinum substrate 1

Locus

NM_009007 UCSC: chr5:144266349-144288861(-) OLP: chr5:144266349-144288861(-)

DB links

Entrez 19353
MGI 97845
Ensembl ENSMUSG00000001847
Vega OTTMUSG00000020705

Feature

protein-coding

GO_BP

41 Terms

GO_MF

9 Terms

GO_CC

12 Terms

KEGG

25 Terms

see DBTMEE:2017904 (v2.0)

SPR_Histone_Erkek_5KaroundTSS

N/A

SPR_Histone_Erkek_2KaroundTSS

N/A

SPR_Methy_Kobayashi_5KaroundTSS

N/A

SPR_Methy_Kobayashi_2KaroundTSS

N/A

SOLiD_OocyteTo4C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	SPR_FPKM	Oo_FPKM	1C_FPKM	2C_FPKM	4C_FPKM	MEF_FPKM
0017391 (v1.0)	Rac1	NM_009007	19353	83.7761	98.1727	45.3378	48.1409	99.3279

SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	SPR_FPKM	1C_FPKM
0017391 (v1.0)	Rac1	NM_009007	19353	87.5956	42.5756	107.109

SOLiD_Partheno1C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	1C_FPKM	p1C_FPKM
0017391 (v1.0)	Rac1	NM_009007	19353	85.502	97.187	110.176

SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	SPR_FPKM	p1C_FPKM
0017391 (v1.0)	Rac1	NM_009007	19353	87.6465	41.9924	120.837

SOLiD_Partheno4C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	2C_FPKM	4C_FPKM	p4C_FPKM
0017391 (v1.0)	Rac1	NM_009007	19353	41.9758	46.482	42.2156

Illumina_Oo_2C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	2C_FPKM
0017391 (v1.0)	Rac1	NM_009007	19353	88.5315	101.818

SOLiD_SC_Oo_REPLICA_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_1_1	Oo_2_1
0017391 (v1.0)	Rac1	NM_009007	19353	157.714	132.978

DBTMEE	Array_Feature_Number	Oligo_Parent_Clone	Unigene	Gene	Entrez	U_Cluster	NAP_Cluster	Gene_U/NAP	TIGR	SwissProt	EST	Oo	1C	2C	4C	8C	Morula	Blastocyst
0017391 (v1.0)	6135	H3018C09-3	Mm.889	Rac1	19353	U026924	NAP108345-1	Rac1;	TC847026,TC847025	P15154	U,F,2	4.1404	4.3052	3.4112	3.1372	3.0746	3.4431	3.7885
0017391 (v1.0)	13187	H3159G02-3		Rac1	19353	U026924	NAP103908-1	Rac1;	TC847047,TC847032,TC847026,TC847025	P15154	U,F,2	4.7372	4.9411	4.1955	4.3004	4.2612	4.4688	4.3759

DBTMEE	Probe_ID	Unigene	Gene	RefSeq	Entrez	Oo	1C	2C	8C	Blastocyst
0017391 (v1.0)	1451086_s_at	Mm.292510	Rac1	NM_009007.2	19353	408.875	878.25	481.775	194.4	603
0017391 (v1.0)	1437674_at	Mm.292510	Rac1	NM_009007.2	19353	23.625	29.325	24.825	39.4	0

DBTMEE	Probe_ID	Gene	Acc	Entrez	Oo1_xFold	Oo1_pVal	Oo1_Flag	Oo2_xFold	Oo2_pVal	Oo2_Flag
0017391 (v1.0)	A_51_P513254	Rac1	NM_009007	19353	1	1	P	0.976	0.846	P
0017391 (v1.0)	A_52_P488220	Rac1	NM_009007	19353	1	1	P	1.113	0.487	P

DBTMEE	Gene	Entrez	GV_seqCount	MII_seqCount	Zygote_seqCount	GV_specCount	MII_specCount	Zygote_specCount
0017391 (v1.0)	Rac1	19353	6	4	6	11	11	14