DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0017393
GeneRac3
SynonymsRac1B
Desc.RAS-related C3 botulinum substrate 3
LocusNM_133223 chr11:120582782-120585283(+)
DB links


Entrez 170758
MGI 2180784
Ensembl ENSMUSG00000018012
Vega OTTMUSG00000004093
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2017906
(v2.0)
Rac3NM_133223170758
3.5319236.061844.13668.0888616.912614.98193.9137557.312624.829914.7218
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0017393
(v1.0)
Rac3170758
Minor ZGA0.90818
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2017906
(v2.0)
Rac3170758
949/5710.2197410/571-0.592887/5710.8728347/5710.6105201/5710.54821345/5710.6358
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2017906
(v2.0)
Rac3170758
447/2200.508188/220-0.341275/2201.9902308/2201.805153/2201.5162918/2201.4575
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2017906
(v2.0)
Rac3170758
128.080222756.42
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2017906
(v2.0)
Rac3170758
39.71313529.42
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0017393
(v1.0)
Rac3NM_133223170758
37.494630.63446.0337311.78252.75557
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0017393
(v1.0)
Rac3NM_133223170758
332.647237.68670.123394.861629.9901
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0017393
(v1.0)
Rac3NM_133223170758
39.2041.2916633.4228
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0017393
(v1.0)
Rac3NM_133223170758
38.26730.326842.5964
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0017393
(v1.0)
Rac3NM_133223170758
32.81448.0452
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0017393
(v1.0)
Rac3NM_133223170758
39.22681.2739746.7183
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0017393
(v1.0)
Rac3NM_133223170758
5.586311.376417.2263
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0017393
(v1.0)
Rac3NM_133223170758
91.6978172.579
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0017393
(v1.0)
Rac3NM_133223170758
11.61161.69098
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0017393
(v1.0)
Rac3NM_133223170758
61.819840.103
NIA60mer N/A
MOE430 N/A
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0017393
(v1.0)
A_51_P455946Rac3NM_133223170758
11P1.670.122P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0017393
(v1.0)
Rac3170758
400400