DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0017394
GeneRacgap1
SynonymsBand25
gtl11
GTPase
MgcRacGAP
Desc.Rac GTPase-activating protein 1
LocusNM_001253808 chr15:99450928-99482087(-)
NM_012025 chr15:99450928-99482087(-)
NM_001253809 chr15:99450928-99482087(-)
DB links


Entrez 26934
MGI 1349423
Ensembl ENSMUSG00000023015
Vega OTTMUSG00000035793
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2017907
(v2.0)
Racgap1NM_001253808,NM_001253809,NM_01202526934
4.8652585.8317136.117174.733174.74319.532572.7353116.878128.73620.0276
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0017394
(v1.0)
Racgap126934
2-Cell Transient0.95037
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2017907
(v2.0)
Racgap126934
687/501-0.0572467/501-0.217189/5011.0897375/5010.91331/5011.45221679/5011.1438
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2017907
(v2.0)
Racgap126934
310/1960.1479215/1960.017268/1962.0082280/1961.8326130/1961.4462654/1961.1351
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2017907
(v2.0)
Racgap126934
57.901114938.86
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2017907
(v2.0)
Racgap126934
9.80727812.57
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0017394
(v1.0)
Racgap1NM_01202526934
86.006391.1299125.603116.86549.9217
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0017394
(v1.0)
Racgap1FR352370,NM_01202526934
161.384170.362346.322319.77184.5123
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0017394
(v1.0)
Racgap1NM_01202526934
89.92751.7157999.4247
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0017394
(v1.0)
Racgap1NM_01202526934
87.778190.214983.5794
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0017394
(v1.0)
Racgap1FR352370,NM_01202526934
337.61270.087
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0017394
(v1.0)
Racgap1NM_01202526934
89.97971.6922891.667
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0017394
(v1.0)
Racgap1NM_01202526934
116.289112.83885.8088
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0017394
(v1.0)
Racgap1FR352370,NM_01202526934
316.317251.785
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0017394
(v1.0)
Racgap1NM_01202526934
17.790342.5468
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0017394
(v1.0)
Racgap1NM_01202526934
44.396833.1672
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0017394
(v1.0)
12624H3148G06-3Mm.27141Racgap126934
U036652NAP097599-001Racgap1;TC793193,TC793192Q9WVM1U,F,23.69253.85473.57273.95453.63173.75134.0626
0017394
(v1.0)
16672K0441F09-3Mm.27141Racgap126934
Racgap13.13293.20413.173.49763.19643.3523.5273
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0017394
(v1.0)
1421546_a_atMm.273804Racgap1NM_012025.626934
177.77597.925123.925112.825151.85
0017394
(v1.0)
1451358_a_atMm.273804Racgap1NM_012025.626934
316.2493.825697.075476.525220.4
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0017394
(v1.0)
A_51_P243750Racgap1NM_01202526934
11P0.3530.0765P
0017394
(v1.0)
A_52_P298465Racgap1NM_01202526934
11P1.7360.117P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0017394
(v1.0)
Racgap126934
202202