DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0017397
GeneRad18
Synonyms
Desc.RAD18 homolog (S. cerevisiae)
LocusNM_001167730 chr6:112569845-112646664(-)
NM_021385 chr6:112569845-112646664(-)
DB links


Entrez 58186
MGI 1890476
Ensembl ENSMUSG00000030254
Vega OTTMUSG00000017314
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2017910
(v2.0)
Rad18NM_001167730,NM_02138558186
2.623126.5862812.2256.258146.975566.558726.2001411.80366.76027.11038
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0017397
(v1.0)
Rad1858186
1-Cell Transient0.99234
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2017910
(v2.0)
Rad1858186
671/4570.0412502/4570.0193199/4572.3711617/4571.758842/457-1.3651374/457-0.8858
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2017910
(v2.0)
Rad1858186
312/1760.3116230/1760.2685189/1763.6153578/1763.028813/176-1.628134/176-0.9846
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2017910
(v2.0)
Rad1858186
69.897613252.95
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2017910
(v2.0)
Rad1858186
26.98458531.75
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0017397
(v1.0)
Rad18NM_001167730,NM_02138558186
6.843868.441654.659014.831594.32557
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0017397
(v1.0)
Rad18FR153491,FR178454,FR282398,NM_001167730,NM_02138558186
20.10521.440218.422318.506411.7244
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0017397
(v1.0)
Rad18NM_001167730,NM_02138558186
7.155880.9593049.21002
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0017397
(v1.0)
Rad18NM_001167730,NM_02138558186
6.984858.356888.74013
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0017397
(v1.0)
Rad18FR153491,FR178454,FR282398,NM_001167730,NM_02138558186
31.450329.28
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0017397
(v1.0)
Rad18NM_001167730,NM_02138558186
7.160040.9461659.58588
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0017397
(v1.0)
Rad18NM_001167730,NM_02138558186
4.313524.66514.68435
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0017397
(v1.0)
Rad18FR153491,FR178454,FR282398,NM_001167730,NM_02138558186
6.399316.4533
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0017397
(v1.0)
Rad18NM_001167730,NM_02138558186
23.48166.49853
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0017397
(v1.0)
Rad18NM_001167730,NM_02138558186
0.7993772.29127
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0017397
(v1.0)
4607C0944C01-3Mm.156900U027717NAP000784-003Rad18;TC833344,TC832015Q9CZB82.51212.68272.63682.63562.55032.56152.5921
0017397
(v1.0)
18936L0237E03-3Mm.103812Rad1858186
U027717NAP000784-001Rad18;TC833344,TC832013Q9CZB82.80452.76542.73072.52332.60662.69792.5119
0017397
(v1.0)
20311L0537A10-3Mm.103812Rad1858186
U027717NAP000784-001Rad18;TC939001,TC833344,TC832014,TC832013Q9CZB82.65922.61192.51872.44833.03022.77312.8759
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0017397
(v1.0)
1451928_a_atMm.103812Rad18NM_001167730.1,NM_021385.258186
47.7582.750044.8
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0017397
(v1.0)
A_51_P480855Rad18NM_02138558186
11P1.1980.416P
0017397
(v1.0)
A_52_P413805Rad18AK02850558186
11P0.7720.236P
Proteome N/A