DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0017416
GeneRae1
Synonyms41
D2Ertd342e
MNRP
MNRP41
Desc.RAE1 RNA export 1 homolog (S. pombe)
LocusNM_175112 chr2:172825618-172841240(+)
DB links


Entrez 66679
MGI 1913929
Ensembl ENSMUSG00000027509
Vega OTTMUSG00000016688
Featureprotein-coding
GO(BP)
  •   1 Terms
      cellular response to organic cyclic compound (GO:0071407)
GO(MF)
GO(CC)
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2017929
(v2.0)
Rae1NM_17511266679
17.298967.9853100.40833.361531.640843.982516.2659114.98330.203744.8871
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0017416
(v1.0)
Rae166679
Minor ZGA0.99262
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2017929
(v2.0)
Rae166679
708/533-0.103450/533-0.3596200/5332.1617579/5331.446454/533-1.2301418/533-0.9475
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2017929
(v2.0)
Rae166679
385/2350.1986259/2350.024190/2353.2293555/2352.558315/235-1.8441163/235-1.1199
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2017929
(v2.0)
Rae166679
96.051117654.57
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2017929
(v2.0)
Rae166679
28.35510527
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0017416
(v1.0)
Rae1NM_17511266679
71.970.703525.191422.330711.7607
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0017416
(v1.0)
Rae1NM_17511266679
169.882150.52359.969247.509433.5759
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0017416
(v1.0)
Rae1NM_17511266679
75.17816.4393377.1391
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0017416
(v1.0)
Rae1NM_17511266679
73.381269.993686.4505
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0017416
(v1.0)
Rae1NM_17511266679
899.0441071.34
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0017416
(v1.0)
Rae1NM_17511266679
75.22176.3511394.816
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0017416
(v1.0)
Rae1NM_17511266679
23.323321.561221.4037
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0017416
(v1.0)
Rae1NM_17511266679
25.292725.0637
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0017416
(v1.0)
Rae1NM_17511266679
30.76815.9854
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0017416
(v1.0)
Rae1NM_17511266679
131.44675.0728
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0017416
(v1.0)
7539H3049F05-3Mm.4113Rae166679
U002907NAP006088-001Rae1;TC853109U,F3.573.62473.73213.52223.36843.44523.3007
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0017416
(v1.0)
1429528_atMm.4113Rae1NM_175112.566679
612.81096.65462.825261.425353.25
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0017416
(v1.0)
A_52_P284778Rae1NM_17511266679
11P1.110.487P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0017416
(v1.0)
Rae166679
220220