DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0017447
GeneRanbp3
Synonyms
Desc.RAN binding protein 3
LocusNM_001252467 chr17:56812648-56851192(+)
NM_027933 chr17:56812648-56851192(+)
NM_001252466 chr17:56812648-56851192(+)
NR_045519 chr17:56812648-56851192(+)
DB links


Entrez 71810
MGI 1919060
Ensembl ENSMUSG00000002372
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2017960
(v2.0)
Ranbp3NM_001252466,NM_001252467,NM_027933,NR_04551971810
21.8531152.18168.715112.463127.83240.449346.8468228.213104.00651.8316
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0017447
(v1.0)
Ranbp371810
Maternal RNA0.99322
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2017960
(v2.0)
Ranbp371810
720/4880.0482432/488-0.2914348/4883.0821014/4882.380455/488-1.0779397/488-0.8946
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2017960
(v2.0)
Ranbp371810
320/1650.4405202/1650.1747300/1654.366820/1653.62446/165-2.537170/165-1.8142
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2017960
(v2.0)
Ranbp371810
48.009914333.57
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2017960
(v2.0)
Ranbp371810
11.47097215.93
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0017447
(v1.0)
Ranbp3NM_02793371810
159.746117.84283.400688.255433.6946
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0017447
(v1.0)
Ranbp3NM_02793371810
379.717306.069211.646207.19132.698
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0017447
(v1.0)
Ranbp3NM_02793371810
167.0297.75523128.568
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0017447
(v1.0)
Ranbp3NM_02793371810
163.037116.658170.525
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0017447
(v1.0)
Ranbp3NM_02793371810
4306.85075.63
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0017447
(v1.0)
Ranbp3NM_02793371810
167.1267.64901187.026
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0017447
(v1.0)
Ranbp3NM_02793371810
77.215985.214270.9525
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0017447
(v1.0)
Ranbp3NM_02793371810
194.999168.898
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0017447
(v1.0)
Ranbp3NM_02793371810
23.021318.0754
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0017447
(v1.0)
Ranbp3NM_02793371810
35.090316.0174
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0017447
(v1.0)
1258C0191F02-3Mm.296082610024N24Rik71810
U018138NAP094614-0012610024N24Rik;TC819418Q9CT10U,F,23.9434.03474.12854.77893.72493.87283.8688
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0017447
(v1.0)
1452673_atMm.29608Ranbp3NM_027933.271810
547.275333.525486.675298.825232.625
0017447
(v1.0)
1457711_atMm.29608Ranbp3NM_027933.271810
000501.6750
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0017447
(v1.0)
A_52_P389043Ranbp3XM_12869871810
11P0.9040.536P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0017447
(v1.0)
Ranbp371810
110110