DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0017457
GeneRap1gds1
SynonymsGDS1
Desc.RAP1, GTP-GDP dissociation stimulator 1
LocusNM_145544 chr3:138588870-138738163(-)
NM_001040690 chr3:138588870-138738163(-)
DB links


Entrez 229877
MGI 2385189
Ensembl ENSMUSG00000028149
Featureprotein-coding
GO(BP)
  •   3 Terms
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2017970
(v2.0)
Rap1gds1NM_001040690,NM_001286759,NM_145544229877
20.258516.121227.655820.161511.32158.6666417.09227.693312.07729.78405
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0017457
(v1.0)
Rap1gds1229877
Minor ZGA0.96124
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2017970
(v2.0)
Rap1gds1229877
701/3680.4159547/3680.4546123/3681.9849371/3681.337148/3680.7372826/3680.5658
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2017970
(v2.0)
Rap1gds1229877
393/1610.7709256/1610.55123/1613.1195339/1612.3874104/1611.4043571/1611.222
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2017970
(v2.0)
Rap1gds1229877
51.577714036.84
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2017970
(v2.0)
Rap1gds1229877
2.7479863.2
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0017457
(v1.0)
Rap1gds1NM_001040690,NM_145544229877
16.748918.998214.97087.8995112.0105
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0017457
(v1.0)
Rap1gds1FR139728,NM_001040690,NM_145544229877
68.507374.337687.880749.73966.7156
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0017457
(v1.0)
Rap1gds1NM_001040690,NM_145544229877
17.51257.4313920.7275
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0017457
(v1.0)
Rap1gds1NM_001040690,NM_145544229877
17.09418.807520.5314
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0017457
(v1.0)
Rap1gds1FR139728,NM_001040690,NM_145544229877
98.946472.6752
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0017457
(v1.0)
Rap1gds1NM_001040690,NM_145544229877
17.52277.3296122.5181
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0017457
(v1.0)
Rap1gds1NM_001040690,NM_145544229877
13.86067.627298.31824
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0017457
(v1.0)
Rap1gds1FR139728,NM_001040690,NM_145544229877
225.362229.403
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0017457
(v1.0)
Rap1gds1NM_001040690,NM_145544229877
13.41417.64111
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0017457
(v1.0)
Rap1gds1NM_001040690,NM_145544229877
9.6049811.5424
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0017457
(v1.0)
20095L0520E04-3Mm.28893LOC229877229877
U024704NAP031926-1TC814790,TC814789Q921Q5U,F3.2023.11433.03392.94552.76552.86682.7337
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0017457
(v1.0)
1425266_a_atMm.28893Rap1gds1NM_001040690.1,NM_145544.2229877
114.65190.45126.9069.9
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0017457
(v1.0)
A_51_P485349Rap1gds1NM_145544229877
11P0.8650.397P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0017457
(v1.0)
Rap1gds1229877
23.51241