DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0017477
GeneRasa1
SynonymsGap
p120-rasGAP
Desc.RAS p21 protein activator 1
LocusNM_145452 chr13:85354304-85429091(-)
DB links


Entrez 218397
MGI 97860
Ensembl ENSMUSG00000021549
Vega OTTMUSG00000016336
Featureprotein-coding
GO(BP)
  •   6 Terms
      negative regulation of cell-matrix adhesion (GO:0001953)
      negative regulation of cell adhesion (GO:0007162)
      signal transduction (GO:0007165)
      regulation of actin filament polymerization (GO:0030833)
      positive regulation of Ras GTPase activity (GO:0032320)
      negative regulation of Ras protein signal transduction (GO:0046580)
GO(MF)
GO(CC)
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2017990
(v2.0)
Rasa1NM_145452218397
6.2102410.206514.571315.43419.159437.2050412.714411.334610.24576.26157
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0017477
(v1.0)
Rasa1218397
Major ZGA0.96629
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2017990
(v2.0)
Rasa1218397
593/2400.7896418/2400.682163/2402.9806422/2402.133928/240-1.0159152/240-1.25
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2017990
(v2.0)
Rasa1218397
404/1391.0212219/1390.5364161/1393.7012401/1392.837510/139-1.644360/139-1.7858
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2017990
(v2.0)
Rasa1218397
23.526210622.19
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2017990
(v2.0)
Rasa1218397
6.2236867.24
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0017477
(v1.0)
Rasa1NM_145452218397
10.608210.048111.49826.34928.78771
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0017477
(v1.0)
Rasa1NM_145452218397
187.713157.104179.701142.312161.891
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0017477
(v1.0)
Rasa1NM_145452218397
11.09182.2711510.9627
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0017477
(v1.0)
Rasa1NM_145452218397
10.82679.947188.37254
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0017477
(v1.0)
Rasa1NM_145452218397
202.4490.6153
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0017477
(v1.0)
Rasa1NM_145452218397
11.09822.240049.18272
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0017477
(v1.0)
Rasa1NM_145452218397
10.64556.130417.09574
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0017477
(v1.0)
Rasa1NM_145452218397
208.291217.387
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0017477
(v1.0)
Rasa1NM_145452218397
11.096315.3916
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0017477
(v1.0)
Rasa1NM_145452218397
5.9846317.6011
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0017477
(v1.0)
11977H3130C04-3Mm.153637LOC218397218397
U035002NAP035680-1RasGAP;TC805203Q91YX7U,F,23.52993.23042.8532.92782.87482.75892.9641
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0017477
(v1.0)
1426476_atMm.259653Rasa1NM_145452.3218397
378.5501.225461.825184.75261.1
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0017477
(v1.0)
A_51_P498322Rasa1NM_145452218397
11P1.2160.308P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0017477
(v1.0)
Rasa1218397
814111164