DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0017503
GeneRassf1
Synonyms123F protein
NORE2A
Rassf1A
Rassf1B
Rassf1C
RDA32
REH3P21
Desc.Ras association (RalGDS/AF-6) domain family member 1
LocusNM_001243748 chr9:107453886-107464598(+)
NM_019713 chr9:107456914-107464598(+)
DB links


Entrez 56289
MGI 1928386
Ensembl ENSMUSG00000010067
Vega OTTMUSG00000030554
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2018016
(v2.0)
Rassf1NM_001243748,NM_01971356289
14.75247.571864.78687.9395714.697518.001322.777677.883210.340524.2045
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0017503
(v1.0)
Rassf156289
Minor ZGA0.94425
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2018016
(v2.0)
Rassf156289
945/5580.2468542/558-0.15791528/5585.02433414/5583.938338/558-1.7917301/558-1.4852
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2018016
(v2.0)
Rassf156289
437/2100.5423254/2100.1575818/2105.48351831/2104.439113/210-1.8774112/210-1.4937
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2018016
(v2.0)
Rassf156289
86.460922238.95
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2018016
(v2.0)
Rassf156289
20.47029721.1
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0017503
(v1.0)
Rassf1NM_01971356289
51.274246.93996.1598510.59216.7497
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0017503
(v1.0)
Rassf1NM_01971356289
62.761155.472413.329920.425328.395
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0017503
(v1.0)
Rassf1NM_01971356289
53.61195.5906251.2124
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0017503
(v1.0)
Rassf1NM_01971356289
52.330546.468659.3328
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0017503
(v1.0)
Rassf1NM_01971356289
84.676969.4522
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0017503
(v1.0)
Rassf1NM_01971356289
53.64315.5140565.0743
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0017503
(v1.0)
Rassf1NM_01971356289
5.7030610.2277.39413
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0017503
(v1.0)
Rassf1NM_01971356289
17.907713.1637
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0017503
(v1.0)
Rassf1NM_01971356289
29.60180.0210085
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0017503
(v1.0)
Rassf1NM_01971356289
51.822417.8633
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0017503
(v1.0)
10798H3103G04-3Mm.12091Rassf156289
U010993NAP003198-002Rassf1;TC926118,TC926117Q9WUF5U,F,23.14093.3272.76252.34152.02792.26412.3094
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0017503
(v1.0)
1441737_s_atMm.12091Rassf1NM_019713.356289
3179.7752670.5251767.1751960.5252868.35
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0017503
(v1.0)
A_51_P435023Rassf1NM_01971356289
11P0.3250.059P
Proteome N/A