DBTMEE

DBTMEE
Database of Transcriptome in Mouse Early Embryos

DBTMEE:0017513

Gene

Raver1

Synonyms

Description

ribonucleoprotein, PTB-binding 1

Locus

NM_027911 UCSC: chr9:20878609-20896432(-) OLP: chr9:20878609-20896432(-)

DB links

Entrez 71766
MGI 1919016
Ensembl ENSMUSG00000010205

Feature

protein-coding

GO_BP

GO_MF

3 Terms

GO_CC

2 Terms

KEGG

see DBTMEE:2018026 (v2.0)

SPR_Histone_Erkek_5KaroundTSS

N/A

SPR_Histone_Erkek_2KaroundTSS

N/A

SPR_Methy_Kobayashi_5KaroundTSS

N/A

SPR_Methy_Kobayashi_2KaroundTSS

N/A

SOLiD_OocyteTo4C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	SPR_FPKM	Oo_FPKM	1C_FPKM	2C_FPKM	4C_FPKM	MEF_FPKM
0017513 (v1.0)	Raver1	NM_027911	71766	25.0081	25.2274	34.8746	14.8605	11.726

SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	SPR_FPKM	1C_FPKM
0017513 (v1.0)	Raver1	NM_027911	71766	26.1483	5.6057	27.5237

SOLiD_Partheno1C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	1C_FPKM	p1C_FPKM
0017513 (v1.0)	Raver1	NM_027911	71766	25.5233	24.9741	53.3346

SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	SPR_FPKM	p1C_FPKM
0017513 (v1.0)	Raver1	NM_027911	71766	26.1635	5.52892	58.4956

SOLiD_Partheno4C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	2C_FPKM	4C_FPKM	p4C_FPKM
0017513 (v1.0)	Raver1	NM_027911	71766	32.2885	14.3484	17.2176

Illumina_Oo_2C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	2C_FPKM
0017513 (v1.0)	Raver1	NM_027911	71766	13.595	164.555

SOLiD_SC_Oo_REPLICA_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_1_1	Oo_2_1
0017513 (v1.0)	Raver1	NM_027911	71766	17.0915	15.537

DBTMEE	Array_Feature_Number	Oligo_Parent_Clone	Unigene	Gene	Entrez	U_Cluster	NAP_Cluster	Gene_U/NAP	TIGR	SwissProt	EST	Oo	1C	2C	4C	8C	Morula	Blastocyst
0017513 (v1.0)	2584	C0340C06-3	Mm.220848	1300006N24Rik	71766	U030568	NAP093429-001	1300006N24Rik;	TC831158,TC831153	Q9CW46		2.2473	2.4639	2.4482	2.3895	2.3092	2.196	2.2181
0017513 (v1.0)	6291	H3022E08-3		1300006N24Rik	71766	U030568	NAP011196-001	1300006N24Rik;	TC849324,TC831154,TC831151	Q9CW46		2.8832	3.0747	3.4687	3.938	3.4496	3.7125	3.8108

DBTMEE	Probe_ID	Unigene	Gene	RefSeq	Entrez	Oo	1C	2C	8C	Blastocyst
0017513 (v1.0)	1427110_at	Mm.432511	Raver1	NM_027911.3	71766	0	0	77.525	97.8	71.575

DBTMEE	Probe_ID	Gene	Acc	Entrez	Oo1_xFold	Oo1_pVal	Oo1_Flag	Oo2_xFold	Oo2_pVal	Oo2_Flag
0017513 (v1.0)	A_51_P318544	1300006N24Rik	NM_027911	71766	1	1	P	0.881	0.44	P
0017513 (v1.0)	A_52_P333355	1300006N24Rik	NM_027911	71766	1	1	P	1.447	0.178	P

N/A