DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0017513
GeneRaver1
Synonyms
Desc.ribonucleoprotein, PTB-binding 1
LocusNM_027911 chr9:20878609-20896432(-)
DB links


Entrez 71766
MGI 1919016
Ensembl ENSMUSG00000010205
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2018026
(v2.0)
Raver1NM_001039824,NM_027911,NR_038081,NR_10605071766
44.763837.587149.415157.664539.771888.519830.764692.864166.8791104.953
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0017513
(v1.0)
Raver171766
Major ZGA0.99746
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2018026
(v2.0)
Raver171766
696/4840.0112361/484-0.537967/4840.7339163/484-0.237512/484-3.173117/484-2.6323
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2018026
(v2.0)
Raver171766
313/2040.1043158/204-0.48262/2041.8226145/2040.8319/204-2.321972/204-2.0789
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2018026
(v2.0)
Raver171766
57.907114041.36
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2018026
(v2.0)
Raver171766
24.223210523.07
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0017513
(v1.0)
Raver1NM_02791171766
25.008125.227434.874614.860511.726
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0017513
(v1.0)
Raver1NM_02791171766
178.137209.141465.866186.38599.0523
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0017513
(v1.0)
Raver1NM_02791171766
26.14835.605727.5237
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0017513
(v1.0)
Raver1NM_02791171766
25.523324.974153.3346
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0017513
(v1.0)
Raver1NM_02791171766
205.097226.822
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0017513
(v1.0)
Raver1NM_02791171766
26.16355.5289258.4956
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0017513
(v1.0)
Raver1NM_02791171766
32.288514.348417.2176
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0017513
(v1.0)
Raver1NM_02791171766
70.739299.1919
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0017513
(v1.0)
Raver1NM_02791171766
13.595164.555
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0017513
(v1.0)
Raver1NM_02791171766
17.091515.537
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0017513
(v1.0)
2584C0340C06-3Mm.2208481300006N24Rik71766
U030568NAP093429-0011300006N24Rik;TC831158,TC831153Q9CW462.24732.46392.44822.38952.30922.1962.2181
0017513
(v1.0)
6291H3022E08-31300006N24Rik71766
U030568NAP011196-0011300006N24Rik;TC849324,TC831154,TC831151Q9CW462.88323.07473.46873.9383.44963.71253.8108
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0017513
(v1.0)
1427110_atMm.432511Raver1NM_027911.371766
0077.52597.871.575
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0017513
(v1.0)
A_51_P3185441300006N24RikNM_02791171766
11P0.8810.44P
0017513
(v1.0)
A_52_P3333551300006N24RikNM_02791171766
11P1.4470.178P
Proteome N/A