DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0017524
GeneRbbp8
SynonymsCtIP
Desc.retinoblastoma binding protein 8
LocusNM_001252495 chr18:11791785-11901716(+)
NR_045527 chr18:11791785-11901716(+)
NM_001081223 chr18:11815858-11901716(+)
NR_045526 chr18:11815858-11901716(+)
DB links


Entrez 225182
MGI 2442995
Ensembl ENSMUSG00000041238
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2018038
(v2.0)
Rbbp8NM_001081223,NM_001252495,NR_045526,NR_045527225182
3.6717221.466140.624360.660749.81515.983738.4340426.700943.89324.96167
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0017524
(v1.0)
Rbbp8225182
2-Cell Transient0.91837
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2018038
(v2.0)
Rbbp8225182
700/3610.4415508/3610.3757198/3612.6941445/3611.626340/361-1.0971231/361-1.238
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2018038
(v2.0)
Rbbp8225182
393/1580.7979238/1580.4723194/1583.7979411/1582.691211/158-1.698686/158-1.4608
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2018038
(v2.0)
Rbbp8225182
34.80099536.63
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2018038
(v2.0)
Rbbp8225182
10.12986914.68
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0017524
(v1.0)
Rbbp8NM_001081223225182
22.794928.696846.625935.80436.10433
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0017524
(v1.0)
Rbbp8FR118315,FR358029,NM_001081223225182
43.264647.871577.33458.400612.7917
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0017524
(v1.0)
Rbbp8NM_001081223225182
23.83411.4005331.3089
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0017524
(v1.0)
Rbbp8NM_001081223225182
23.264528.408719.5691
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0017524
(v1.0)
Rbbp8FR118315,FR358029,NM_001081223225182
63.336942.5403
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0017524
(v1.0)
Rbbp8NM_001081223225182
23.8481.3813521.4627
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0017524
(v1.0)
Rbbp8NM_001081223225182
43.168334.570531.1736
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0017524
(v1.0)
Rbbp8FR118315,FR358029,NM_001081223225182
73.018172.1961
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0017524
(v1.0)
Rbbp8NM_001081223225182
10.040841.7446
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0017524
(v1.0)
Rbbp8NM_001081223225182
9.4778610.472
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0017524
(v1.0)
1322C0199C01-3Mm.292169.93E+27225182
U018416NAP096614-001TC854152,TC854151,TC854150U,F,23.64343.49963.22943.44272.87232.90162.7149
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0017524
(v1.0)
1427061_atMm.154275Rbbp8NM_001081223.1225182
412.775683.95954.075527.05174.9
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0017524
(v1.0)
A_51_P300936Rbbp8BC050849225182
11P1.1170.466P
Proteome N/A