DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0017526
GeneRbck1
SynonymsHOIL-1
HOIL-1L
Ubce7ip3
Desc.RanBP-type and C3HC4-type zinc finger containing 1
LocusNM_019705 chr2:152142070-152158375(-)
NM_001083921 chr2:152142070-152158161(-)
DB links


Entrez 24105
MGI 1344372
Ensembl ENSMUSG00000027466
Vega OTTMUSG00000015834
Featureprotein-coding
GO(BP)
  •   11 Terms
      protein polyubiquitination (GO:0000209)
      transcription, DNA-dependent (GO:0006351)
      negative regulation of NF-kappaB transcription factor activity (GO:0032088)
      positive regulation of NF-kappaB import into nucleus (GO:0042346)
      positive regulation of apoptotic process (GO:0043065)
      positive regulation of I-kappaB kinase/NF-kappaB cascade (GO:0043123)
      proteasomal ubiquitin-dependent protein catabolic process (GO:0043161)
      positive regulation of transcription from RNA polymerase II promoter (GO:0045944)
      T cell receptor signaling pathway (GO:0050852)
      positive regulation of NF-kappaB transcription factor activity (GO:0051092)
      protein linear polyubiquitination (GO:0097039)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2018041
(v2.0)
Rbck1NM_001083921,NM_01970524105
21.4335.489686.1093510.884413.283823.209312.84437.512289.200126.6815
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0017526
(v1.0)
Rbck124105
MGA0.98182
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2018041
(v2.0)
Rbck124105
638/4360.0363371/436-0.3482106/4361.5347191/4360.139849/436-1.0803440/436-0.5845
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2018041
(v2.0)
Rbck124105
294/1910.1089156/191-0.405895/1912.5197181/1911.242814/191-1.643991/191-1.6527
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2018041
(v2.0)
Rbck124105
69.709513053.62
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2018041
(v2.0)
Rbck124105
19.24577625.32
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0017526
(v1.0)
Rbck1NM_001083921,NM_01970524105
5.703814.278.124629.187159.11658
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0017526
(v1.0)
Rbck1NM_001083921,NM_01970524105
9.599910.906720.14420.675126.6006
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0017526
(v1.0)
Rbck1NM_001083921,NM_01970524105
5.963857.837644.65866
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0017526
(v1.0)
Rbck1NM_001083921,NM_01970524105
5.821314.227125.53784
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0017526
(v1.0)
Rbck1NM_001083921,NM_01970524105
19.53420.3674
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0017526
(v1.0)
Rbck1NM_001083921,NM_01970524105
5.967327.730296.07372
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0017526
(v1.0)
Rbck1NM_001083921,NM_01970524105
7.522138.870566.34872
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0017526
(v1.0)
Rbck1NM_001083921,NM_01970524105
20.960818.807
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0017526
(v1.0)
Rbck1NM_001083921,NM_01970524105
1.585312.73332
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0017526
(v1.0)
Rbck1NM_001083921,NM_01970524105
1.697350.318466
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0017526
(v1.0)
19896L0507A12-3Mm.28806Ubce7ip3-pending24105
U023499NAP009534-001Ubce7ip3;TC798711,TC798707Q9WUB0U,F,24.14344.03863.87533.96424.75274.27694.6831
MOE430 N/A
Agilent44K N/A
Proteome N/A